LOCUS       BGC0001171              5892 bp    DNA     linear   BCT 31-JAN-2014
DEFINITION  Listeria monocytogenes str. 4b F2365, complete genome.
ACCESSION   BGC0001171
VERSION     BGC0001171
KEYWORDS    .
SOURCE      Listeria monocytogenes serotype 4b str. F2365
  ORGANISM  Listeria monocytogenes serotype 4b str. F2365
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
COMMENT     On or before Dec 7, 2005 this sequence version replaced AE017322.1,
            AE017323.1, AE017324.1, AE017325.1, AE017326.1, AE017327.1,
            AE017328.1, AE017329.1, AE017330.1, AE017331.1, AE017262.1.
            ##antiSMASH-Data-START##
            Version      :: 7.1.0
            Run date     :: 2024-10-17 15:02:40
            ##antiSMASH-Data-END##
FEATURES             Location/Qualifiers
     protocluster    1..5892
                     /aStool="rule-based-clusters"
                     /category="RiPP"
                     /contig_edge="True"
                     /core_location="[2205:5312]"
                     /cutoff="20000"
                     /detection_rule="((((goadsporin_like or PF00881 or
                     TIGR03605) and (YcaO or TIGR03604)) or TIGR03882 or
                     TIGR03603 or TIGR03602) and not cyanobactin_synth)"
                     /neighbourhood="10000"
                     /product="LAP"
                     /protocluster_number="1"
                     /tool="antismash"
     proto_core      2206..5312
                     /aStool="rule-based-clusters"
                     /tool="antismash"
                     /cutoff="20000"
                     /detection_rule="((((goadsporin_like or PF00881 or
                     TIGR03605) and (YcaO or TIGR03604)) or TIGR03882 or
                     TIGR03603 or TIGR03602) and not cyanobactin_synth)"
                     /neighbourhood="10000"
                     /product="LAP"
                     /protocluster_number="1"
     cand_cluster    1..5892
                     /candidate_cluster_number="1"
                     /contig_edge="True"
                     /detection_rules="((((goadsporin_like or PF00881 or
                     TIGR03605) and (YcaO or TIGR03604)) or TIGR03882 or
                     TIGR03603 or TIGR03602) and not cyanobactin_synth)"
                     /kind="single"
                     /product="LAP"
                     /protoclusters="1"
                     /tool="antismash"
     subregion       1..5892
                     /aStool="externally annotated by: MIBiG"
                     /contig_edge="True"
                     /label="BGC0001171"
                     /subregion_number="1"
                     /tool="antismash"
     region          1..5892
                     /candidate_cluster_numbers="1"
                     /contig_edge="True"
                     /product="LAP"
                     /region_number="1"
                     /rules="((((goadsporin_like or PF00881 or TIGR03605) and
                     (YcaO or TIGR03604)) or TIGR03882 or TIGR03603 or
                     TIGR03602) and not cyanobactin_synth)"
                     /subregion_numbers="1"
                     /tool="antismash"
     gene            complement(66..191)
                     /locus_tag="LMOf2365_1112"
     CDS             complement(66..191)
                     /codon_start=1
                     /locus_tag="LMOf2365_1112"
                     /note="identified by Glimmer2; putative"
                     /product="hypothetical protein"
                     /protein_id="AAT03889.1"
                     /transl_table=11
                     /translation="MKRDTNVSLFHSKIYILVAADDAHVHVHVQVEQEHEQHPAA"
     gene            215..1102
                     /locus_tag="LMOf2365_1113"
     CDS             215..1102
                     /codon_start=1
                     /gene_functions="transport (smcogs) SMCOG1000:ABC
                     transporter ATP-binding protein (Score: 115.9; E-value:
                     3.8e-35)"
                     /gene_kind="transport"
                     /locus_tag="LMOf2365_1113"
                     /note="identified by match to protein family HMM PF00005"
                     /product="ABC transporter, ATP-binding protein"
                     /protein_id="AAT03890.1"
                     /transl_table=11
                     /translation="MNNILETKNLKVTINNKVILYLDKEVCISEKDKVAILGDNGAGKT
                     TLVNSILGEKNSSGEITKKFKKNDCGVVFQENAYNDLMKVYELITLVLPHLKKKERAQF
                     LHKYELESLRKKYIKDLSGGEKQRLTLCLVLESHKKLYIFDELTSGLDYKKRLGLLALM
                     KEKTKDATVINITHYFEEVENWATKVLILQKGILLFWGTISEFFSNFPHYSVIKVDQIE
                     LTKIDETDMTFMQSTDTGDGIAVICSDLQIQEETKKILDKKNVTYNTIKQNIYTTYLVA
                     YLRGTSSSEQEVLI"
     gene            1102..1851
                     /locus_tag="LMOf2365_1114"
     CDS             1102..1851
                     /codon_start=1
                     /locus_tag="LMOf2365_1114"
                     /product="putative transporter"
                     /protein_id="AAT03891.1"
                     /transl_table=11
                     /translation="MSYLWTSIKMQFRIPVSVFFSLLFPLIMMFAMVTSYGNFDIGEGY
                     HFVDKYFLISTGMGMLPIALISFPIWLGESVQNKSYKRLEYFGLSAQKIIVSDVCSYIL
                     LTALSIFVNILFGYLVYGLHIPDWQYFIAYVLQCLYCNLVLLIFGALLALIIKNPRILM
                     PVGMCLLFMFYIFTGTFSSFSELPKSFQAVGNFLPMKYIMNDLFNVWTQNKLFISKFLA
                     LNTLYGIILSFALVAFLLRQKKIKIKP"
     gene            1892..2209
                     /locus_tag="LMOf2365_1115"
     CDS             1892..2209
                     /codon_start=1
                     /locus_tag="LMOf2365_1115"
                     /note="identified by Glimmer2; putative"
                     /product="hypothetical protein"
                     /protein_id="AAT03892.1"
                     /transl_table=11
                     /translation="MKKKFSNPTFRIIASIVLGILIGVLICFVAIGLGYIHMNDGTLKE
                     YSVKIFGLTIFDIKRVGSEMVGTPNNTSMMFIGVIISMILAIVVEIIVSLKNRHRKETA
                     K"
     gene            2206..3081
                     /locus_tag="LMOf2365_1116"
     CDS             2206..3081
                     /codon_start=1
                     /gene_functions="biosynthetic (rule-based-clusters) LAP:
                     PF00881"
                     /gene_kind="biosynthetic"
                     /locus_tag="LMOf2365_1116"
                     /product="conserved domain protein"
                     /protein_id="AAT03893.1"
                     /sec_met_domain="PF00881 (E-value: 3.1e-16, bitscore: 49.0,
                     seeds: 78, tool: rule-based-clusters)"
                     /transl_table=11
                     /translation="MIDYEKKGFFNIHTLVNKDNANISNSDNKHIYSQLMSGNGNSPML
                     GYLLNMNKQNLNDFKSIMFYNESNLASLINEAREMEELIDSSTLFLSKTNKKIKTHFSK
                     VLEQRHSTRNFVYETMDLSTFSNIIQFSFGLSTRKLVYNDLQSTTRHYSSGGGLYPIDV
                     FLYINNISGIAKGIYKYQPYTHSLHPLDVDKIDVESFFVGDNIDTSNMNFCVFFGYSIN
                     KNYVKYGELSLLNTFVELGGISHNFDLVCHSVHYTSCPIAGFNKSYIEKLLYLDGINDH
                     IIFTNICGKE"
     gene            3089..4006
                     /locus_tag="LMOf2365_1117"
     CDS             3089..4006
                     /codon_start=1
                     /gene_functions="biosynthetic (rule-based-clusters) LAP:
                     TIGR03603"
                     /gene_functions="biosynthetic-additional
                     (rule-based-clusters) Cytolysin_C_RRE"
                     /gene_kind="biosynthetic"
                     /locus_tag="LMOf2365_1117"
                     /note="identified by Glimmer2; putative"
                     /product="hypothetical protein"
                     /protein_id="AAT03894.1"
                     /sec_met_domain="Cytolysin_C_RRE (E-value: 1.4e-17,
                     bitscore: 53.0, seeds: 8, tool: rule-based-clusters)"
                     /sec_met_domain="TIGR03603 (E-value: 1.8e-80, bitscore:
                     260.0, seeds: 5, tool: rule-based-clusters)"
                     /transl_table=11
                     /translation="MKNFDIRIGTQTIDNDTEFILKRGVIHKNEIVINKEESSKEFVST
                     FKELVKKKTITISSEDAIYNDFETLTKFGFLTISKNQTLKPLLIVEDALFDDVKSYFQE
                     EIEILSSSEFLLKKDIRLLTENKDILQLTKLVDEKKELMKNYNYIYLITNISNISLLRG
                     FNKLMKETNSVNTIAFFDNENVFVTCIEHGETGCYECLERQLLSHFDGVVTDYLVQSEN
                     NVSTAELMFVLSIIKKEIENTSIYGQSSLLGNLLHFNFNNYEYTFNTNRIQSCCSTCAT
                     FNNILFEEQNIRSVNILKELMSSD"
     gene            3999..5312
                     /locus_tag="LMOf2365_1118"
     CDS             3999..5312
                     /codon_start=1
                     /gene_functions="biosynthetic (rule-based-clusters) LAP:
                     YcaO"
                     /gene_functions="biosynthetic (rule-based-clusters) LAP:
                     TIGR03604"
                     /gene_kind="biosynthetic"
                     /locus_tag="LMOf2365_1118"
                     /note="identified by similarity to GP:19747978"
                     /product="conserved hypothetical protein"
                     /protein_id="AAT03895.1"
                     /sec_met_domain="YcaO (E-value: 2.1e-37, bitscore: 118.6,
                     seeds: 127, tool: rule-based-clusters)"
                     /sec_met_domain="TIGR03604 (E-value: 4.2e-104, bitscore:
                     337.4, seeds: 25, tool: rule-based-clusters)"
                     /transl_table=11
                     /translation="MISIQNNLEYNKLRWETLSGNVTGIWENNKFFLGSSSYPIMKYHY
                     ITANFVNFEKHISENMPKISYHLSGYGVNFNEALVSFIGESAERYTYSLLPTIIKDRII
                     FRSYEEMTKEYKTDLICELKYINSYYSSEVCENYVTPNDTIQWIAMNSLVHSDKKVWMP
                     LQFVTMYTEEMFSNEKRYVTSAVSTGTACHETVEKSIENALIEYLQIDSFNLWWYGGFR
                     ARDIEIDITRNISSWFDNQVAVKKFLSKFNVHFSDISFDKSIYIVLCEIEAKNSSDAFP
                     KYTVGVQGGYSLDKSIYRAFMECLTVLEYNMNVTWTDKEKFLSVTQETRVIDNLDDNVI
                     YYSKYGKPELQYNTNQLKNDTEKVTNLKALLEKLPTISQYAAFLPITPSEFRYMNCEIS
                     RVILPELLSIHLPSYPPYYHVRYEEIGGVVNNIPHPIA"
     gene            5305..5892
                     /locus_tag="LMOf2365_1119"
     CDS             5305..5892
                     /codon_start=1
                     /gene_functions="biosynthetic-additional
                     (rule-based-clusters) Abi"
                     /gene_kind="biosynthetic-additional"
                     /locus_tag="LMOf2365_1119"
                     /note="identified by match to protein family HMM PF02517"
                     /product="CAAX amino terminal protease family protein"
                     /protein_id="AAT03896.1"
                     /sec_met_domain="Abi (E-value: 1.9e-09, bitscore: 27.0,
                     seeds: 823, tool: rule-based-clusters)"
                     /transl_table=11
                     /translation="MHNIFFLITLFPGMLLLLTKWIPVLSRKSTFFQYLLCLFLITIMN
                     SLFFRQQFVVVLSLICILFLPFILFFVEYIFVERQWKKLLTIYKKNKIFIQSIVWFPVL
                     EEIIFRFFIYQYCELFDFSNIQYILLATFSFVIAHIFYQGVSSIVKILFSFILSILFLL
                     TLNIFLTIIIHCIFNFLVYIVRTSKYENHRNW"
ORIGIN
        1 atgaatatta aatcacaatc atcaaatggc tacagtaata atgctgtagg ctctgaagca
       61 atgaactatg cagctggatg ttgctcatgt tcttgttcaa cttgcacatg tacatgtaca
      121 tgcgcatcat ctgctgcaac caaaatgtaa attttagaat gaaaaaggga tacatttgtg
      181 tcccttttca ataagttatg aggtgcatgt gcatatgaat aatattttgg aaacgaaaaa
      241 tttgaaagtt acaataaata ataaagtaat tctatattta gataaagaag tttgtatttc
      301 agaaaaagac aaagttgcca ttctaggaga caatggagct gggaaaacca cgttagtaaa
      361 tagtattctt ggtgaaaaga actcttctgg agaaattacc aaaaagttta aaaaaaatga
      421 ctgtggtgta gtgtttcaag aaaatgcata taatgatttg atgaaagttt atgaattgat
      481 tactttagtt ctgccacatc taaagaaaaa agagagagcg cagtttttac acaaatatga
      541 acttgaaagt ttgagaaaaa agtacattaa agacttatct ggtggagaaa aacaacgact
      601 aacactatgt ttagtactag aaagtcataa gaaattatat atctttgatg agttaacttc
      661 aggattagat tataagaaga gactaggttt acttgctttg atgaaagaaa aaactaagga
      721 cgcgacggtg ataaatataa cgcattactt tgaggaagtt gaaaactggg caacgaaagt
      781 tttgattctt caaaaaggaa ttttactttt ttggggaaca atatcagaat ttttctctaa
      841 ttttcctcat tattctgtta ttaaagtaga tcaaatcgaa ctaacaaaga tagatgaaac
      901 agatatgact tttatgcaaa gcacagatac aggtgacggg atagcagtta tttgttcgga
      961 tttgcaaatt caggaagaga caaagaaaat tttggataaa aaaaacgtca catacaacac
     1021 aataaaacaa aatatatata caacttattt agttgcatat ttgcgcggaa catcaagcag
     1081 tgaacaggag gtactgatat aatgagttat ttatggacaa gtattaaaat gcaatttaga
     1141 attccagtat ctgtgttttt ctcattatta tttccactaa tcatgatgtt cgctatggtt
     1201 acttcttatg gaaactttga tattggtgaa ggttatcatt ttgtagataa atattttttg
     1261 attagtacag ggatgggcat gttaccaata gcattaatca gttttccaat ctggcttggt
     1321 gaaagtgttc aaaataaaag ctataaaaga ttagaatatt ttggattgag tgcacagaaa
     1381 ataattgttt cagatgtatg ttcttatatt ttgctaacag ccttaagtat ttttgtcaat
     1441 atactgtttg gctacttggt atatggacta catatcccag actggcaata ttttattgct
     1501 tatgttttgc aatgtctgta ttgtaatcta gtgcttttga tttttggtgc cttgcttgct
     1561 ttaattatta aaaatccccg gatattgatg ccagtaggaa tgtgtttatt atttatgttt
     1621 tatattttta caggaacatt ttcatctttt tcggaacttc ctaaatcatt tcaagcagtt
     1681 ggtaattttt tacctatgaa atatataatg aatgatttat ttaatgtttg gacacaaaat
     1741 aaattgttca tctctaagtt tttagcttta aacacgttat atggaatcat cttatcattc
     1801 gcactagttg cttttttgtt gaggcaaaag aaaataaaaa ttaaaccata atttattata
     1861 ctcaaggtat agaaaggatt gtttgtaatc tatgaaaaaa aaatttagta atcccacgtt
     1921 tagaattatt gcatcaattg ttctagggat tttgataggt gttcttattt gctttgtggc
     1981 tattggttta ggttacattc acatgaatga tggcacatta aaagagtata gtgtgaaaat
     2041 tttcggacta actatttttg atattaaaag agttggtagt gagatggtgg gaacacctaa
     2101 taacactagc atgatgttta taggggttat tatttctatg atactagcta ttgttgtaga
     2161 aattattgtt tcgttaaaaa acagacatag aaaggaaaca gcaaaatgat cgactatgag
     2221 aaaaaaggct tttttaacat ccacacattg gtaaataaag ataatgctaa tatttctaat
     2281 agtgataata aacatattta ttcccagctg atgtctggta atggcaattc accaatgcta
     2341 ggttatttat taaatatgaa taaacaaaac ttgaatgact tcaaaagtat catgttttat
     2401 aatgaatcta atctagcttc tttaattaac gaggcaagag aaatggaaga attaatagat
     2461 agctcaactc tttttttaag taaaacaaat aaaaaaatta aaacccattt ttctaaagtg
     2521 cttgagcaaa gacatagtac aagaaatttt gtatacgaaa ccatggattt atcaacattc
     2581 tcaaatatca tacagttttc ttttggcctt agtacaagaa agttggttta taacgactta
     2641 caatcaacca ccaggcatta ttcttctggg ggcggtttat atccaattga tgtttttttg
     2701 tatataaata atatttctgg aattgccaag ggtatatata aatatcagcc atacacgcat
     2761 agcttgcatc ctctagatgt agataaaatt gatgtagagt cgtttttcgt aggtgataat
     2821 attgacactt ctaatatgaa tttttgtgtt ttctttggat actctattaa taaaaactat
     2881 gtgaaatatg gagaactatc tttactgaat acgtttgtgg aactaggagg aatatcacac
     2941 aactttgatt tagtttgtca ttcggttcac tatacaagtt gtcctattgc aggttttaac
     3001 aagtcgtaca tagagaagct tttatattta gatgggataa atgatcacat tatatttaca
     3061 aatatttgtg gaaaggaatg atatttttat gaaaaatttt gatattagaa taggaacgca
     3121 gacaattgac aatgatacgg aattcatttt aaaaagaggg gttattcata agaatgagat
     3181 cgttatcaat aaagaggaaa gttcaaaaga atttgtttca acatttaaag aattggtcaa
     3241 gaaaaaaact attactatat cttcagaaga tgcaatctac aatgattttg aaacacttac
     3301 aaaatttggc tttttaacaa tttctaaaaa ccaaacctta aaacctctct tgatagttga
     3361 agatgctttg tttgatgacg tgaagagcta tttccaggaa gaaattgaga ttttatcatc
     3421 ctctgaattt cttttaaaaa aagatattcg gttacttact gagaacaaag atatattgca
     3481 acttactaaa ctagtagatg aaaaaaagga attaatgaaa aattataatt atatttattt
     3541 aatcacaaac atttccaata tttccttatt acgtggattt aacaagttaa tgaaagagac
     3601 taacagtgtt aataccatcg cattttttga taatgaaaat gtatttgtta cttgtataga
     3661 acatggagaa actggctgct atgagtgttt agagcggcaa ctactctctc attttgatgg
     3721 tgttgttacg gattatttag tacagtcaga aaataatgtt tccacagctg aattgatgtt
     3781 tgttctttca atcataaaaa aagaaatcga aaatacctct atttatggtc aatcttctct
     3841 gttaggcaat cttctccact ttaattttaa taactacgag tatacgttta atacaaatag
     3901 aatccaaagt tgttgttcta cctgtgctac tttcaataat atattatttg aagagcaaaa
     3961 cattcggtca gtgaatatac taaaggagct gatgagtagt gattagcata caaaataatt
     4021 tggaatataa caagttacgt tgggaaactt tgagtggaaa tgtaacagga atatgggaga
     4081 ataataagtt ctttctaggc tctagttctt accctattat gaagtatcat tacattacag
     4141 ctaattttgt taattttgaa aaacatattt ctgaaaatat gcctaaaata agttaccatt
     4201 taagtggata tggtgttaat tttaatgaag cgcttgttag ttttattggt gaaagcgcag
     4261 agagatatac atattcctta ctacctacta ttattaagga caggattatt tttagatcat
     4321 atgaagaaat gacaaaagaa tataaaactg acttaatatg tgaacttaaa tacataaatt
     4381 cgtattactc ttctgaagta tgcgaaaatt atgttactcc aaatgatact attcaatgga
     4441 tagcaatgaa ttctcttgtt cattctgata aaaaagtatg gatgcctttg caatttgtta
     4501 ctatgtatac agaagaaatg ttttctaatg aaaaaagata tgtaactagc gctgtatcaa
     4561 caggcactgc ttgtcatgaa actgtagaaa aaagtataga aaatgcccta attgaatatc
     4621 ttcaaattga ttcctttaat ttatggtggt atggagggtt tcgtgcgaga gatatagaaa
     4681 tagatatcac tcgaaatata tcaagctggt tcgacaatca agtagctgtg aaaaaatttt
     4741 tatcaaagtt taatgtacat ttttcagata taagttttga taaatcaatt tatattgtgc
     4801 tatgcgaaat agaggcaaaa aattcaagtg atgcctttcc taaatatact gttggcgttc
     4861 aaggcggata ttcactagat aaatcaatat atcgtgcatt tatggaatgt ctaactgtac
     4921 tagaatataa tatgaatgtc acttggacag ataaagagaa atttctttca gtcacacagg
     4981 aaacacgtgt tatagataat ttggatgata atgttattta ttattcaaag tatggaaaac
     5041 cagaattgca atataatact aatcaattaa agaatgatac ggaaaaagtt acaaatctga
     5101 aggcactttt agaaaagttg cccacaatta gtcagtatgc tgcattctta cctatcacac
     5161 cttcagagtt tagatatatg aattgtgaaa taagcagggt gattcttcca gaattgttat
     5221 ccattcatct tccttcatat ccgccttact accatgtaag atatgaagaa attggaggtg
     5281 tggtaaataa tattccacat ccaattgcat aacatctttt ttttaatcac attatttcca
     5341 ggtatgcttc ttttattgac gaaatggatt ccagttctat ctagaaagag tacttttttt
     5401 caatatttac tttgtttatt cttgatcaca attatgaata gtttgttttt ccgtcaacag
     5461 tttgtggtag ttttatcgct gatatgtatt ttattcttac catttattct gttttttgta
     5521 gaatatatat ttgttgagag acaatggaaa aagttgctta ctatttataa aaaaaataaa
     5581 atttttatcc aatctattgt atggtttcct gttttagaag aaataatttt ccgttttttt
     5641 atttatcaat actgtgagtt atttgatttc agtaatatcc agtatatatt actagccacc
     5701 ttttcattcg tgattgcaca tattttttat caaggagtgt cttcaattgt caaaatacta
     5761 ttttctttta tattaagtat attattttta ttaacactaa atatattttt gacaataata
     5821 attcactgta ttttcaactt tttagtttat atagttcgta ctagtaaata tgagaaccac
     5881 cgtaattggt aa
//
