BGC0001195: nocardiopsin A biosynthetic gene cluster from Nocardiopsis sp. CMB-M0232
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
View antiSMASH-generated output
Download Cluster GenBank file
Download region SVG
Location: 3,538 - 80,239 nt. (total: 76,702 nt).
This entry is originally from NCBI GenBank KP339942.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
TTA codons
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
Biosynthesis
History
NRPS/PKS domains
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0001195
Short description nocardiopsin A biosynthetic gene cluster from Nocardiopsis sp. CMB-M0232
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • NRPS (Type I)
  • PKS (Unknown)
Loci
KP339942.1
3538 - 80239
via
Compounds
  • nocardiopsin A
  • nocardiopsin B
  • nocardiopsin C
  • nocardiopsin D
Species Nocardiopsis sp. CMB-M0232 [taxonomy]
References
Chemical products information
nocardiopsin A Evidence:
Copy SMILES
C33H51N1O7
Chemical database entries
PubCHEM
nocardiopsin B Evidence:
Copy SMILES
C33H53N1O7
Chemical database entries
PubCHEM
nocardiopsin C Evidence:
Copy SMILES
C32H49N1O7
Chemical database entries
PubCHEM
nocardiopsin D Evidence:
Copy SMILES
C32H51N1O7
Chemical database entries
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • AJW65397.1
 3538 - 4254 (-) AraC regulator
    copy AA seq
    copy Nt seq
    • AJW65398.1
    		 4518 - 5114 (+) transcription regulator
      copy AA seq
      copy Nt seq
      • AJW65399.1
      		 5477 - 6226 (+) oxidoreductase
        copy AA seq
        copy Nt seq
        • AJW65400.1
        		 6472 - 7716 (-) cytochrome P450 monooxygenase
          copy AA seq
          copy Nt seq
          • AJW65401.1
          		 8232 - 8873 (-) transport protein
            copy AA seq
            copy Nt seq
            • AJW65402.1
            		 8870 - 9322 (-) transport protein
              copy AA seq
              copy Nt seq
              • AJW65403.1
              		 9705 - 12326 (+) ATPase
                copy AA seq
                copy Nt seq
                • AJW65404.1
                		 12499 - 13578 (-) cytochrome P450 epoxidase
                  copy AA seq
                  copy Nt seq
                  • AJW65405.1
                  		 14040 - 15077 (+) lysine cyclodeaminase
                    copy AA seq
                    copy Nt seq
                    • AJW65406.1
                    		 15207 - 19841 (+) nonribosomal peptide synthetase
                      copy AA seq
                      copy Nt seq
                      • AJW65407.1
                      		 19885 - 39114 (+) type I modular polyketide synthase
                        copy AA seq
                        copy Nt seq
                        • AJW65408.1
                        		 39249 - 54749 (+) type I modular polyketide synthase
                          copy AA seq
                          copy Nt seq
                          • AJW65409.1
                          		 54742 - 69555 (+) type I modular polyketide synthase
                            copy AA seq
                            copy Nt seq
                            • AJW65410.1
                            		 69604 - 75009 (+) type I modular polyketide synthase
                              copy AA seq
                              copy Nt seq
                              • AJW65411.1
                              		 75088 - 75525 (-) epoxide hydrolase
                                copy AA seq
                                copy Nt seq
                                • AJW65412.1
                                		 75947 - 76639 (+) LuxR transcription regulator
                                  copy AA seq
                                  copy Nt seq
                                  • AJW65413.1
                                  		 76830 - 77753 (-) 2Fe-2S-binding protein
                                    copy AA seq
                                    copy Nt seq
                                    • AJW65414.1
                                    		 78143 - 79438 (+) glycosyltransferase
                                      copy AA seq
                                      copy Nt seq
                                      • AJW65415.1
                                      		 79838 - 80239 (+) XRE family transcription regulator
                                        copy AA seq
                                        copy Nt seq
                                        Biosynthesis information
                                        Annotation changelog

                                        Entry version: 2

                                        Date
                                        Changes
                                        Submitters
                                        Reviewers
                                        2019-10-16
                                        Migrated from v1.4
                                        • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                        • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                        2019-10-16
                                        Updated compound(s) information (MIBiG Annotathon)
                                        • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                        • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                        Entry version: 1

                                        Date
                                        Changes
                                        Submitters
                                        Reviewers
                                        2015-08-17
                                        Submitted
                                        • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                        • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                        Detailed domain annotation
                                        Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
                                        A domain glossary is available here, and an explanation of the visualisation is available here.
                                        Selected features only
                                        Show module domains
                                        Similar known gene clusters from MIBiG 4.0
                                        Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
                                        Click on reference genes to show details of similarities to genes within the current region.
                                        Click on an accession to open that entry in the MiBIG database.