BGC0001197 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

BGC0001197 (Frankia sp. EAN1pec)

Region	Type	From	To	Similarity Confidence	Most similar known cluster
Region 1	T2PKS	1	72,636	High	frankiamicin	PKS

BGC0001197 - Region 1 - T2PKS

Download region GenBank file

Download region SVG

Location: 1 - 72,636 nt. (total: 72,636 nt) Show pHMM detection rules used

Region on contig edge.

T2PKS: (t2ks and t2clf)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

MIBiG

Tailoring

MIBiG comparison

KnownClusterBlast

NRPS/PKS domains

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

External annotation

Name		MIBiG
Version		4.0alpha

Type		Subregion
Location		1 - 72,637
Label		BGC0001197

Tailoring functions

Oxidoreductases: dehydrogenase

Franean1_2395: short-chain dehydrogenase/reductase SDR

smcogs: SMCOG1001: short-chain dehydrogenase/reductase SDR

Lyases: cyclase

Franean1_2389: Polyketide synthesis cyclase

smcogs: SMCOG1225: Polyketide synthesis cyclase

Franean1_2391: cyclase/dehydrase

smcogs: SMCOG1128: cyclase/dehydrase

Ligases: synthase

Franean1_2393: Beta-ketoacyl synthase

smcogs: SMCOG1022: Beta-ketoacyl synthase

Franean1_2394: Beta-ketoacyl synthase

smcogs: SMCOG1093: Beta-ketoacyl synthase

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001197.5	1.00	PKS	frankiamicin	Frankia sp. EAN1pec
BGC0000231.5	0.64	PKS	griseusin A, griseusin B	Streptomyces griseus
BGC0000272.3	0.63	PKS	spore pigment	Streptomyces collinus
BGC0000234.5	0.58	PKS	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0000215.5	0.55	PKS	curamycin	Streptomyces cyaneus
BGC0001723.5	0.55	PKS	oviedomycin	Streptomyces antibioticus
BGC0000271.5	0.54	PKS	spore pigment	Streptomyces avermitilis
BGC0000275.4	0.53	PKS	tetracenomycin C	Streptomyces glaucescens
BGC0000217.5	0.53	PKS	daunorubicin	Streptomyces sp.
BGC0000221.5	0.52	PKS	erdacin	uncultured soil bacterium V167

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001197.5	1.00	PKS	frankiamicin	Frankia sp. EAN1pec
BGC0000231.5	0.64	PKS	griseusin A, griseusin B	Streptomyces griseus
BGC0000272.3	0.63	PKS	spore pigment	Streptomyces collinus
BGC0000234.5	0.58	PKS	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0000215.5	0.55	PKS	curamycin	Streptomyces cyaneus
BGC0001723.5	0.55	PKS	oviedomycin	Streptomyces antibioticus
BGC0000271.5	0.54	PKS	spore pigment	Streptomyces avermitilis
BGC0000275.4	0.53	PKS	tetracenomycin C	Streptomyces glaucescens
BGC0000217.5	0.53	PKS	daunorubicin	Streptomyces sp.
BGC0000221.5	0.52	PKS	erdacin	uncultured soil bacterium V167

Similar known clusters from MIBiG 4.0

Detailed domain annotation

Selected features only

Show module domains

Type II PKS

Type II PKS gene cluster prediction details

Cluster section:: 0 to 72636
Starter unit(s):: acetyl-CoA (Score: 0.0; E-value: 0)
Product class(es):: pentangular polyphenol
tetracenomycin

Franean1_2389: CYC C4-C21/C2-C23|C2-C19 (Score: 153.8; E-value: 3e-48)
Franean1_2390: ACP (Score: 45.9; E-value: 9.8e-15)
Franean1_2391: CYC C9-C14 (Score: 230.9; E-value: 1.1e-71)
Franean1_2392: CYC C5-C18 (Score: 198.5; E-value: 7.9e-62)
Franean1_2393: KS (Score: 716.7; E-value: 1.9e-218)
Franean1_2394: CLF (Score: 547.5; E-value: 4.1e-167)
Franean1_2395: KR C19 (Score: 338.1; E-value: 7.1e-104)