BGC0001314: tirucalla biosynthetic gene cluster from Arabidopsis thaliana
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Location: 14,190,000 - 14,250,000 nt. (total: 60,001 nt).
This entry is originally from NCBI GenBank NC_003076.8, but has been modified (see Modifications tab for details).

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core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
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General
Compounds
Genes
History
KnownClusterBlast
Modifications
General information about the BGC
MIBiG accession BGC0001314
Short description tirucalla biosynthetic gene cluster from Arabidopsis thaliana
Status Minimal annotation: yes
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: Unknown
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • Terpene
Loci NCBI GenBank: NC_003076.8
Compounds
  • tirucalla
Species Arabidopsis thaliana [taxonomy]
References
Chemical products information
tirucalla
Copy SMILES
C30H50O1
Chemical database entries
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • AT5G36100
  • NP_198459.4
 14191711 - 14193654 (-) transmembrane protein
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  • AT5G36100_rename1
  • NP_001119315.1
 14192855 - 14193654 (-) transmembrane protein
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  • AT5G36110_rename1
  • NP_001332668.1
  • CYP716A1
 14195377 - 14197248 (+) cytochrome P450, family 716, subfamily A, polypeptide 1
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  • AT5G36110
  • NP_198460.1
  • CYP716A1
 14195377 - 14197613 (+) cytochrome P450, family 716, subfamily A, polypeptide 1
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  • AT5G36120
  • NP_198461.2
  • CCB3
 14198679 - 14199203 (-) cofactor assembly, complex C (B6F)
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  • AT5G36130
  • NP_198462.1
 14209293 - 14209811 (-) Cytochrome P450 superfamily protein
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  • AT5G36140
  • NP_198463.1
  • CYP716A2
 14212212 - 14213259 (-) cytochrome P450, family 716, subfamily A, polypeptide 2
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  • AT5G36150
  • NP_001318680.1
  • PEN3
 14220737 - 14225422 (-) putative pentacyclic triterpene synthase 3
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  • AT5G36160
  • NP_198465.3
 14233261 - 14235129 (-) Tyrosine transaminase family protein
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  • AT5G36170_rename1
  • NP_851096.1
  • HCF109
 14236083 - 14237974 (-) high chlorophyll fluorescent 109
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  • AT5G36170
  • NP_851097.1
  • HCF109
 14236083 - 14237974 (-) high chlorophyll fluorescent 109
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  • AT5G36170_rename3
  • NP_198466.2
  • HCF109
 14236297 - 14237974 (-) high chlorophyll fluorescent 109
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  • AT5G36170_rename2
  • NP_001332421.1
  • HCF109
 14236297 - 14237974 (-) high chlorophyll fluorescent 109
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  • AT5G36180
  • NP_198467.2
  • scpl1
 14239198 - 14241862 (+) serine carboxypeptidase-like 1
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  • AT5G36180_rename3
  • NP_001331682.1
  • scpl1
 14239666 - 14241519 (+) serine carboxypeptidase-like 1
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  • AT5G36180_rename2
  • NP_001331685.1
  • scpl1
 14239666 - 14241862 (+) serine carboxypeptidase-like 1
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  • AT5G36180_rename1
  • NP_001331684.1
  • scpl1
 14239666 - 14241908 (+) serine carboxypeptidase-like 1
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  • AT5G36190
  • NP_198468.1
 14243109 - 14243546 (-) F-box protein interaction domain protein
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  • AT5G36200
  • NP_198469.1
 14244106 - 14246296 (-) F-box and associated interaction domains-containing protein
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Annotation changelog
MIBiG version Submitter Notes
1.3
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Submitted
2.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Migrated from v1.4
Similar known gene clusters
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Modifications to original record
  • renamed CDS with name AT5G36100 at join{[14193047:14193654](-), [14192854:14192958](-)} to AT5G36100_rename1 to avoid duplicates
  • renamed CDS with name AT5G36110 at join{[14195376:14195915](+), [14196047:14196454](+), [14197036:14197248](+)} to AT5G36110_rename1 to avoid duplicates
  • removed an exact duplicate of CDS feature AT5G36150
  • renamed CDS with name AT5G36170 at join{[14237808:14237974](-), [14237652:14237724](-), [14237340:14237561](-), [14237060:14237264](-), [14236759:14236975](-), [14236498:14236685](-), [14236082:14236387](-)} to AT5G36170_rename1 to avoid duplicates
  • renamed CDS with name AT5G36170 at join{[14237808:14237974](-), [14237652:14237721](-), [14237340:14237561](-), [14237060:14237264](-), [14236759:14236975](-), [14236498:14236685](-), [14236296:14236406](-)} to AT5G36170_rename2 to avoid duplicates
  • renamed CDS with name AT5G36170 at join{[14237808:14237974](-), [14237652:14237724](-), [14237340:14237561](-), [14237060:14237264](-), [14236759:14236975](-), [14236498:14236685](-), [14236296:14236406](-)} to AT5G36170_rename3 to avoid duplicates
  • renamed CDS with name AT5G36180 at join{[14239665:14239731](+), [14239820:14239943](+), [14240035:14240138](+), [14240350:14240490](+), [14240575:14240662](+), [14240757:14240826](+), [14240904:14240976](+), [14241057:14241176](+), [14241247:14241361](+), [14241781:14241908](+)} to AT5G36180_rename1 to avoid duplicates
  • renamed CDS with name AT5G36180 at join{[14239665:14239731](+), [14239820:14239943](+), [14240035:14240138](+), [14240350:14240490](+), [14240575:14240662](+), [14240757:14240826](+), [14240904:14240976](+), [14241057:14241176](+), [14241247:14241361](+), [14241446:14241492](+), [14241781:14241862](+)} to AT5G36180_rename2 to avoid duplicates
  • removed an exact duplicate of CDS feature AT5G36180
  • renamed CDS with name AT5G36180 at join{[14239665:14239731](+), [14239820:14239943](+), [14240035:14240138](+), [14240350:14240490](+), [14240575:14240662](+), [14240757:14240826](+), [14240904:14240976](+), [14241057:14241176](+), [14241247:14241361](+), [14241446:14241519](+)} to AT5G36180_rename3 to avoid duplicates