BGC0001314: tirucalla biosynthetic gene cluster from Arabidopsis thaliana
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Location: 14,190,000 - 14,250,000 nt. (total: 60,001 nt).
This entry is originally from NCBI GenBank NC_003076.8, but has been modified (see Modifications tab for details).

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core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
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Gene details
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General
Compounds
Genes
Biosynthesis
History
KnownClusterBlast
Modifications
General information about the BGC
MIBiG accession BGC0001314
Short description tirucalla biosynthetic gene cluster from Arabidopsis thaliana
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • terpene (Unknown)
Loci
NC_003076.8
14190000 - 14250000
via
Compounds
  • tirucalla
Species Arabidopsis thaliana [taxonomy]
References
Chemical products information
tirucalla Evidence:
Copy SMILES
C30H50O1
Chemical database entries
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • AT5G36100
  • NP_198459.4
 14191711 - 14193654 (-) uncharacterized protein
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    • AT5G36100_rename1
    • NP_001119315.1
    		 14192855 - 14193654 (-) uncharacterized protein
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      • AT5G36110_rename1
      • NP_001332668.1
      • CYP716A1
      		 14195377 - 14197248 (+) cytochrome P450, family 716, subfamily A, polypeptide 1
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        • AT5G36110
        • NP_198460.1
        • CYP716A1
        		 14195377 - 14197613 (+) cytochrome P450, family 716, subfamily A, polypeptide 1
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          • AT5G36120
          • NP_198461.2
          • CCB3
          		 14198679 - 14199203 (-) cofactor assembly, complex C (B6F)
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            • AT5G36130
            • NP_198462.1
            		 14209293 - 14209811 (-) Cytochrome P450 superfamily protein
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              • AT5G36140
              • NP_198463.1
              • CYP716A2
              		 14212212 - 14213259 (-) cytochrome P450, family 716, subfamily A, polypeptide 2
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                • AT5G36150
                • NP_001318680.1
                • PEN3
                		 14220737 - 14225422 (-) putative pentacyclic triterpene synthase 3
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                  • AT5G36160
                  • NP_198465.3
                  		 14233261 - 14235129 (-) Tyrosine transaminase family protein
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                    • AT5G36170_rename1
                    • NP_851096.1
                    • HCF109
                    		 14236083 - 14237974 (-) high chlorophyll fluorescent 109
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                      • AT5G36170
                      • NP_851097.1
                      • HCF109
                      		 14236083 - 14237974 (-) high chlorophyll fluorescent 109
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                        • AT5G36170_rename3
                        • NP_198466.2
                        • HCF109
                        		 14236297 - 14237974 (-) high chlorophyll fluorescent 109
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                          • AT5G36170_rename2
                          • NP_001332421.1
                          • HCF109
                          		 14236297 - 14237974 (-) high chlorophyll fluorescent 109
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                            • AT5G36180
                            • NP_198467.2
                            • scpl1
                            		 14239198 - 14241862 (+) serine carboxypeptidase-like 1
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                              • AT5G36180_rename3
                              • NP_001331682.1
                              • scpl1
                              		 14239666 - 14241519 (+) serine carboxypeptidase-like 1
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                                • AT5G36180_rename2
                                • NP_001331685.1
                                • scpl1
                                		 14239666 - 14241862 (+) serine carboxypeptidase-like 1
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                                  • AT5G36180_rename1
                                  • NP_001331684.1
                                  • scpl1
                                  		 14239666 - 14241908 (+) serine carboxypeptidase-like 1
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                                    • AT5G36190
                                    • NP_198468.1
                                    		 14243109 - 14243546 (-) F-box protein interaction domain protein
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                                      • AT5G36200
                                      • NP_198469.1
                                      		 14244106 - 14246296 (-) F-box and associated interaction domains-containing protein
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                                        Biosynthesis information
                                        Annotation changelog

                                        Entry version: 2

                                        Date
                                        Changes
                                        Submitters
                                        Reviewers
                                        2019-10-16
                                        Migrated from v1.4
                                        • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                        • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                        Entry version: 1

                                        Date
                                        Changes
                                        Submitters
                                        Reviewers
                                        2016-09-03
                                        Submitted
                                        • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                        • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                        Similar known gene clusters from MIBiG 4.0
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                                        Modifications to original record
                                        • renamed CDS with name AT5G36100 at join{[14193047:14193654](-), [14192854:14192958](-)} to AT5G36100_rename1 to avoid duplicates
                                        • renamed CDS with name AT5G36110 at join{[14195376:14195915](+), [14196047:14196454](+), [14197036:14197248](+)} to AT5G36110_rename1 to avoid duplicates
                                        • removed an exact duplicate of CDS feature AT5G36150
                                        • renamed CDS with name AT5G36170 at join{[14237808:14237974](-), [14237652:14237724](-), [14237340:14237561](-), [14237060:14237264](-), [14236759:14236975](-), [14236498:14236685](-), [14236082:14236387](-)} to AT5G36170_rename1 to avoid duplicates
                                        • renamed CDS with name AT5G36170 at join{[14237808:14237974](-), [14237652:14237721](-), [14237340:14237561](-), [14237060:14237264](-), [14236759:14236975](-), [14236498:14236685](-), [14236296:14236406](-)} to AT5G36170_rename2 to avoid duplicates
                                        • renamed CDS with name AT5G36170 at join{[14237808:14237974](-), [14237652:14237724](-), [14237340:14237561](-), [14237060:14237264](-), [14236759:14236975](-), [14236498:14236685](-), [14236296:14236406](-)} to AT5G36170_rename3 to avoid duplicates
                                        • renamed CDS with name AT5G36180 at join{[14239665:14239731](+), [14239820:14239943](+), [14240035:14240138](+), [14240350:14240490](+), [14240575:14240662](+), [14240757:14240826](+), [14240904:14240976](+), [14241057:14241176](+), [14241247:14241361](+), [14241781:14241908](+)} to AT5G36180_rename1 to avoid duplicates
                                        • renamed CDS with name AT5G36180 at join{[14239665:14239731](+), [14239820:14239943](+), [14240035:14240138](+), [14240350:14240490](+), [14240575:14240662](+), [14240757:14240826](+), [14240904:14240976](+), [14241057:14241176](+), [14241247:14241361](+), [14241446:14241492](+), [14241781:14241862](+)} to AT5G36180_rename2 to avoid duplicates
                                        • removed an exact duplicate of CDS feature AT5G36180
                                        • renamed CDS with name AT5G36180 at join{[14239665:14239731](+), [14239820:14239943](+), [14240035:14240138](+), [14240350:14240490](+), [14240575:14240662](+), [14240757:14240826](+), [14240904:14240976](+), [14241057:14241176](+), [14241247:14241361](+), [14241446:14241519](+)} to AT5G36180_rename3 to avoid duplicates