BGC0001316: linamarin biosynthetic gene cluster from Lotus japonicus
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Location: 1 - 409,731 nt. (total: 409,731 nt).

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core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
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Gene details
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General
Compounds
Genes
Biosynthesis
History
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0001316
Short description linamarin biosynthetic gene cluster from Lotus japonicus
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • other (other)
Loci
MIBIG.BGC0001316.1
via
Compounds
  • linamarin
  • lotaustralin
Species Lotus japonicus [taxonomy]
References
Chemical products information
linamarin [synonyms: alpha-Hydroxyisobutyronitrile beta-D-glucose, Manihotoxin, Phaseolunatin, alpha-Hydroxyisobutyronitrile-beta-D-glucose, alpha-Hydroxyisobutyronitrile beta-D-glucopyranoside] Evidence:
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C10H17N1O6
lotaustralin Evidence:
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C11H19N1O6
Chemical database entries
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • chr3.CM0241.310.r2.m
 1 - 2100 (-)
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    • chr3.CM0241.410.r2.d
    		 95020 - 96511 (-)
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      • chr3.CM0241.500.r2.d
      		 138745 - 139582 (+)
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        • chr3.CM0241.530.r2.d
        		 144918 - 145093 (-)
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          • chr3.CM0241.540.r2.d
          		 146511 - 147591 (-)
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            • chr3.CM0241.600.r2.m
            		 185461 - 187306 (+)
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              • chr3.CM0241.610.r2.m
              		 192227 - 194404 (+)
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                • chr3.CM0241.630.r2.m
                		 199712 - 200233 (+)
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                  • chr3.CM0241.640.r2.m
                  		 202528 - 203798 (-)
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                    • chr3.CM0241.650.r2.m
                    		 208029 - 208185 (-)
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                      • chr3.CM0241.660.r2.m
                      		 212655 - 214771 (+)
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                        • chr3.CM0241.700.r2.m
                        		 241841 - 245434 (-)
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                          • chr3.CM0241.710.r2.a
                          		 245984 - 246474 (-)
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                            • chr3.CM0241.740.r2.a
                            		 268259 - 268684 (-)
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                              • chr3.CM0241.750.r2.a
                              		 279232 - 279539 (-)
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                                • chr3.CM0241.760.r2.a
                                		 282094 - 283032 (-)
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                                  • chr3.CM0241.770.r2.a
                                  		 311047 - 311485 (-)
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                                    • chr3.CM0241.850.r2.m
                                    		 355566 - 358155 (+)
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                                      • chr3.CM0241.860.r2.m
                                      		 367119 - 368484 (+)
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                                        • chr3.CM0241.870.r2.m
                                        		 373328 - 373822 (-)
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                                          • chr3.CM0241.880.r2.m
                                          		 378823 - 379203 (+)
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                                            • chr3.CM0241.890.r2.m
                                            		 382801 - 384318 (+)
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                                              • chr3.CM0241.930.r2.a
                                              		 405332 - 405827 (+)
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                                                • chr3.CM0241.940.r2.a
                                                		 407536 - 409731 (+)
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                                                  Biosynthesis information
                                                  Annotation changelog

                                                  Entry version: next

                                                  Date
                                                  Changes
                                                  Submitters
                                                  Reviewers
                                                  2024-07-25
                                                  MIBiG v4 annotathon
                                                  • (ID: C62OJVVH7XOTOTFZSJT727YU)
                                                  • (ID: 2U5WMR7MBJ4KI76XQF5437F7)
                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                                  Entry version: 3

                                                  Date
                                                  Changes
                                                  Submitters
                                                  Reviewers
                                                  2022-09-15
                                                  Cleaned up synonym list
                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                                  Entry version: 2

                                                  Date
                                                  Changes
                                                  Submitters
                                                  Reviewers
                                                  2019-10-16
                                                  Migrated from v1.4
                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                  2019-10-16
                                                  Updated compound(s) information (MIBiG Annotathon)
                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                  2019-10-16
                                                  Updated compound(s) information (NPAtlas curation)
                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                                  Entry version: 1

                                                  Date
                                                  Changes
                                                  Submitters
                                                  Reviewers
                                                  2016-09-03
                                                  Submitted
                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
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