BGC0001316: linamarin biosynthetic gene cluster from Lotus japonicus
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Location: 1 - 409,731 nt. (total: 409,731 nt).

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core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
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Gene details
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General
Compounds
Genes
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KnownClusterBlast
General information about the BGC
MIBiG accession BGC0001316
Short description linamarin biosynthetic gene cluster from Lotus japonicus
Status Minimal annotation: yes
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: Unknown
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • Other
Loci NCBI GenBank: MIBIG.BGC0001316.1
Compounds
  • linamarin
  • lotaustralin
Species Lotus japonicus [taxonomy]
References
Chemical products information
linamarin [synonyms: Phaseolunatin, alpha-Hydroxyisobutyronitrile-beta-D-glucose, Manihotoxin, alpha-Hydroxyisobutyronitrile beta-D-glucose, alpha-Hydroxyisobutyronitrile beta-D-glucopyranoside]
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C10H17N1O6
lotaustralin
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C11H19N1O6
Chemical database entries
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • chr3.CM0241.310.r2.m
 1 - 2100 (-)
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  • chr3.CM0241.410.r2.d
 95020 - 96511 (-)
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  • chr3.CM0241.500.r2.d
 138745 - 139582 (+)
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  • chr3.CM0241.530.r2.d
 144918 - 145093 (-)
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  • chr3.CM0241.540.r2.d
 146511 - 147591 (-)
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  • chr3.CM0241.600.r2.m
 185461 - 187306 (+)
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  • chr3.CM0241.610.r2.m
 192227 - 194404 (+)
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  • chr3.CM0241.630.r2.m
 199712 - 200233 (+)
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  • chr3.CM0241.640.r2.m
 202528 - 203798 (-)
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  • chr3.CM0241.650.r2.m
 208029 - 208185 (-)
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  • chr3.CM0241.660.r2.m
 212655 - 214771 (+)
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  • chr3.CM0241.700.r2.m
 241841 - 245434 (-)
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  • chr3.CM0241.710.r2.a
 245984 - 246474 (-)
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  • chr3.CM0241.740.r2.a
 268259 - 268684 (-)
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  • chr3.CM0241.750.r2.a
 279232 - 279539 (-)
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  • chr3.CM0241.760.r2.a
 282094 - 283032 (-)
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  • chr3.CM0241.770.r2.a
 311047 - 311485 (-)
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  • chr3.CM0241.850.r2.m
 355566 - 358155 (+)
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  • chr3.CM0241.860.r2.m
 367119 - 368484 (+)
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  • chr3.CM0241.870.r2.m
 373328 - 373822 (-)
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  • chr3.CM0241.880.r2.m
 378823 - 379203 (+)
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  • chr3.CM0241.890.r2.m
 382801 - 384318 (+)
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  • chr3.CM0241.930.r2.a
 405332 - 405827 (+)
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  • chr3.CM0241.940.r2.a
 407536 - 409731 (+)
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Annotation changelog
MIBiG version Submitter Notes
1.3
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Submitted
2.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Migrated from v1.4
  • Updated compound(s) information (MIBiG Annotathon)
  • Updated compound(s) information (NPAtlas curation)
3.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Cleaned up synonym list
Similar known gene clusters
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