Genomic loci for this biosynthetic pathway

Cluster Type From To
The following clusters are from record BGC0001347.1:
Cluster 1NRP19583
The following clusters are from record BGC0001347.2:
Cluster 2NRP130362

BGC0001347, poaeamide B biosynthetic gene cluster from Pseudomonas synxantha. Locus 1. Full MIBiG entry.

Chemical compounds

Compound: Poaeamide B
SMILES string: Copy to clipboard
Molecular formula: C61H108N10O17
Exact molecular mass: 1253.7965 Da ([M+H]+)
Molecular activity: Unknown

Class-specific details

Biosynthetic class(es):
NRP
Cyclic depsipeptide (cyclic)
Thioesterase type:
Unknown
Release / cyclization type:
None

Nonribosomal peptide synthetases:
No gene ID (ANQ43347.1)
Module 1
A specificity: Leucine
Evidence for specificity: Sequence-based prediction
C domain subtype: Starter
Module 2
A specificity: Glutamate
Evidence for specificity: Sequence-based prediction
C domain subtype: Dual
No gene ID (ANQ43348.1)
Module 1
A specificity: Threonine
Evidence for specificity: Sequence-based prediction
C domain subtype: Dual
Module 2
A specificity: Isoleucine
Evidence for specificity: Sequence-based prediction
C domain subtype: Dual
Module 3
A specificity: Leucine
Evidence for specificity: Sequence-based prediction
C domain subtype: Dual
Module 4
A specificity: Serine
Evidence for specificity: Sequence-based prediction
C domain subtype: Dual
No gene ID (ANQ43349.1)
Module 5
A specificity: Leucine
Evidence for specificity: Sequence-based prediction
C domain subtype: Dual
Module 6
A specificity: Leucine
Evidence for specificity: Sequence-based prediction
C domain subtype: LCL
Module 7
A specificity: Serine
Evidence for specificity: Sequence-based prediction
C domain subtype: LCL
Module 8
A specificity: Isoleucine
Evidence for specificity: Structure-based inference
C domain subtype: Dual

Gene cluster description

poaeamide B (BGC0001347). Gene Cluster 1. Biosynthetic class = NRP. GenBank KU936045, positions 1-9583. Click on genes for more information.

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Domain annotation

Homologous known gene clusters

General MIBiG information on this cluster

Complete gene cluster sequence?incomplete
Evidence for cluster-compound connection:Gene expression correlated with compound production, Sequence-based prediction
MIxS-compliance:Unknown
Comments:Pseudomonas synxantha strain CR32 (poaeamide B producer) NCBI accession: KU936045 and KU936046 http://www.ncbi.nlm.nih.gov/nuccore/KU936045 http://www.ncbi.nlm.nih.gov/nuccore/KU936046
Contact for this cluster:Don D. Nguyen (EMBL)

Literature references

BGC0001347, poaeamide B biosynthetic gene cluster from Pseudomonas synxantha. Locus 2. Full MIBiG entry.

Chemical compounds

Compound: Poaeamide B
SMILES string: Copy to clipboard
Molecular formula: C61H108N10O17
Exact molecular mass: 1253.7965 Da ([M+H]+)
Molecular activity: Unknown

Class-specific details

Biosynthetic class(es):
NRP
Cyclic depsipeptide (cyclic)
Thioesterase type:
Unknown
Release / cyclization type:
None

Nonribosomal peptide synthetases:
No gene ID (ANQ43347.1)
Module 1
A specificity: Leucine
Evidence for specificity: Sequence-based prediction
C domain subtype: Starter
Module 2
A specificity: Glutamate
Evidence for specificity: Sequence-based prediction
C domain subtype: Dual
No gene ID (ANQ43348.1)
Module 1
A specificity: Threonine
Evidence for specificity: Sequence-based prediction
C domain subtype: Dual
Module 2
A specificity: Isoleucine
Evidence for specificity: Sequence-based prediction
C domain subtype: Dual
Module 3
A specificity: Leucine
Evidence for specificity: Sequence-based prediction
C domain subtype: Dual
Module 4
A specificity: Serine
Evidence for specificity: Sequence-based prediction
C domain subtype: Dual
No gene ID (ANQ43349.1)
Module 5
A specificity: Leucine
Evidence for specificity: Sequence-based prediction
C domain subtype: Dual
Module 6
A specificity: Leucine
Evidence for specificity: Sequence-based prediction
C domain subtype: LCL
Module 7
A specificity: Serine
Evidence for specificity: Sequence-based prediction
C domain subtype: LCL
Module 8
A specificity: Isoleucine
Evidence for specificity: Structure-based inference
C domain subtype: Dual

Gene cluster description

poaeamide B (BGC0001347). Gene Cluster 2. Biosynthetic class = NRP. GenBank KU936046, positions 1-30362. Click on genes for more information.

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Domain annotation

Homologous known gene clusters

General MIBiG information on this cluster

Complete gene cluster sequence?incomplete
Evidence for cluster-compound connection:Gene expression correlated with compound production, Sequence-based prediction
MIxS-compliance:Unknown
Comments:Pseudomonas synxantha strain CR32 (poaeamide B producer) NCBI accession: KU936045 and KU936046 http://www.ncbi.nlm.nih.gov/nuccore/KU936045 http://www.ncbi.nlm.nih.gov/nuccore/KU936046
Contact for this cluster:Don D. Nguyen (EMBL)

Literature references