LOCUS       BGC0001361              4580 bp    DNA     linear   BCT 30-JAN-2014
DEFINITION  Serratia plymuthica 4Rx13, complete genome.
ACCESSION   BGC0001361
VERSION     BGC0001361
KEYWORDS    .
SOURCE      Serratia plymuthica 4Rx13
  ORGANISM  Serratia plymuthica 4Rx13
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Yersiniaceae; Serratia.
COMMENT     Serratia odorifera 4Rx13 is available at the Strain Collection of
            Antagonistic Microorganisms (SCAM; University of Rostock,
            Microbiology).
            ##antiSMASH-Data-START##
            Version      :: 7.1.0
            Run date     :: 2024-10-17 15:24:15
            NOTE: This is a single region extracted from a larger record!
            Orig. start  :: 0
            Orig. end    :: 4580
            ##antiSMASH-Data-END##
FEATURES             Location/Qualifiers
     protocluster    1..4580
                     /aStool="rule-based-clusters"
                     /category="terpene"
                     /contig_edge="True"
                     /core_location="[0:1155]"
                     /cutoff="20000"
                     /detection_rule="(Terpene_synth or Terpene_synth_C or
                     phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7
                     or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)"
                     /neighbourhood="10000"
                     /product="terpene"
                     /protocluster_number="1"
                     /tool="antismash"
     proto_core      1..1155
                     /aStool="rule-based-clusters"
                     /tool="antismash"
                     /cutoff="20000"
                     /detection_rule="(Terpene_synth or Terpene_synth_C or
                     phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7
                     or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)"
                     /neighbourhood="10000"
                     /product="terpene"
                     /protocluster_number="1"
     cand_cluster    1..4580
                     /candidate_cluster_number="1"
                     /contig_edge="True"
                     /detection_rules="(Terpene_synth or Terpene_synth_C or
                     phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7
                     or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)"
                     /kind="single"
                     /product="terpene"
                     /protoclusters="1"
                     /tool="antismash"
     subregion       1..4580
                     /aStool="externally annotated by: MIBiG"
                     /contig_edge="True"
                     /label="BGC0001361"
                     /subregion_number="1"
                     /tool="antismash"
     region          1..4580
                     /candidate_cluster_numbers="1"
                     /contig_edge="True"
                     /product="terpene"
                     /region_number="1"
                     /rules="(Terpene_synth or Terpene_synth_C or phytoene_synt
                     or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps
                     or fung_ggpps2 or trichodiene_synth or TRI5)"
                     /subregion_numbers="1"
                     /tool="antismash"
     gene            complement(1..1155)
                     /locus_tag="SOD_c20750"
     CDS             complement(1..1155)
                     /codon_start=1
                     /gene_functions="biosynthetic (rule-based-clusters)
                     terpene: Terpene_synth_C"
                     /gene_functions="biosynthetic-additional (smcogs)
                     SMCOG1052:Terpene synthase/cyclase metal-binding domain
                     protein (Score: 177.3; E-value: 8.4e-54)"
                     /gene_kind="biosynthetic"
                     /locus_tag="SOD_c20750"
                     /product="putative terpene cyclase"
                     /protein_id="AGO55049.1"
                     /sec_met_domain="Terpene_synth_C (E-value: 1.1e-13,
                     bitscore: 39.3, seeds: 87, tool: rule-based-clusters)"
                     /transl_table=11
                     /translation="MNTNDFLSPEAQPMLTSQPVMHIVPDYNPFNRQYKVHPLKAEVEK
                     KALDFMERYRLYWTEEQRQRLYGQDCGGIAGYVYTLAPNAEQLQLGADLAMIAFTWDDE
                     FCDEGPTRDKPMEMADSAFRTIRALECHDIIVDKNDRYAVAMRDILQRVRQLSPDYLAN
                     QWVDSVRHWFFIEIQKASNVARGIRPNLSDYVVTRMHTGATPTFMLNTQIANGLELGPG
                     LLFDRRVNALMELARTVVNWSSDCYSYFKEAERTADGYNIIDVLMDTHNLSVEAAMAMA
                     FNMQDRMLMRFVELRDEVLNGPHDKGAEIYIDALEEYTIGGILWCQETQRYRFIDGTTS
                     GRLAYTASGFTRQARGNELSEPIDIPTIAWWWQVGERADQYGRR"
     gene            complement(1196..2173)
                     /locus_tag="SOD_c20760"
     CDS             complement(1196..2173)
                     /NRPS_PKS="Domain: oMT (103-223). E-value: 5.8e-19. Score:
                     59.3. Matches aSDomain: nrpspksdomains_SOD_c20760_oMT.1"
                     /codon_start=1
                     /gene_functions="biosynthetic-additional (smcogs)
                     SMCOG1089:methyltransferase (Score: 67; E-value: 3.1e-20)"
                     /gene_kind="biosynthetic-additional"
                     /locus_tag="SOD_c20760"
                     /product="hypothetical protein"
                     /protein_id="AGO55050.1"
                     /transl_table=11
                     /translation="MSNLSEMMSPDPVYLQNLPYQVIRDSHTDSYEEKVVQTYCEEPEH
                     WRKAIGDTLLFQFGVYEDAAHAPALTPTSKLKPTAGLDESSVRYFEQQLFLAGVTGSDR
                     PAMHRILDIGCGWGYILKHLAERYPECQRLDGVNVSAQQLNYCARSHAEQGLSGRINLF
                     LCNAQDIGLLPDPDDLYDLVIIRGVISHFPNELYEKAMRALFTRVRPGGKVIISDNLYN
                     VEPDRYQSDTPDIVDRLACRHQKTPAYFSQVLEDSGFTIKDFRVLPSNVDVAHWLMDSK
                     ANIERHFPTGVDGALEELRVLAENWSVALLKNKVSTYSVIACKK"
     aSDomain        complement(1505..1864)
                     /aSDomain="MT"
                     /aSTool="nrps_pks_domains"
                     /database="nrpspksdomains.hmm"
                     /detection="hmmscan"
                     /domain_id="nrpspksdomains_SOD_c20760_oMT.1"
                     /domain_subtypes="oMT"
                     /evalue="5.80E-19"
                     /label="SOD_c20760_oMT.1"
                     /locus_tag="SOD_c20760"
                     /protein_end="223"
                     /protein_start="103"
                     /score="59.3"
                     /tool="antismash"
                     /translation="RPAMHRILDIGCGWGYILKHLAERYPECQRLDGVNVSAQQLNYCA
                     RSHAEQGLSGRINLFLCNAQDIGLLPDPDDLYDLVIIRGVISHFPNELYEKAMRALFTR
                     VRPGGKVIISDNLYNV"
     gene            complement(2170..4008)
                     /gene="dxs"
                     /locus_tag="SOD_c20770"
     CDS             complement(2170..4008)
                     /EC_number="2.2.1.7"
                     /codon_start=1
                     /gene="dxs"
                     /gene_functions="biosynthetic-additional
                     (rule-based-clusters) DXP_synthase_N"
                     /gene_functions="biosynthetic-additional (smcogs)
                     SMCOG1110:1-deoxy-D-xylulose-5-phosphate synthase (Score:
                     313.5; E-value: 1.8e-95)"
                     /gene_kind="biosynthetic-additional"
                     /locus_tag="SOD_c20770"
                     /product="1-deoxy-D-xylulose-5-phosphate synthase Dxs"
                     /protein_id="AGO55051.1"
                     /sec_met_domain="DXP_synthase_N (E-value: 5.7e-92,
                     bitscore: 295.8, seeds: 174, tool: rule-based-clusters)"
                     /transl_table=11
                     /translation="MDTLLELINFPIDLRKLTREQLAQAAHELRAFLLSSIAKSGGHLA
                     SNLGVVELTLALHYVFDTPNDRIVWDVGHQCYPHKAITGRRGQMSNLRHKGGISGFPRR
                     DESPYDSFGTAHSSTSISAALGMAHAARLQRQARRCIAVIGDGALSAGLAFEAMNNATL
                     DPDLPLLVILNDNDMSISPSVGALKQHLVALHGGESASLFSTLGFDYSGPVDGHDLATL
                     IPALERMRDRRGVQLLHVITRKGQGFSHAEADPVNYHAPAKFCPQAGILPTAAGKLTYT
                     RVFGDWLCDEAEHDARVVGITPAMREGSGLVTFQQRFPDRYFDVGIAEQHAVTFAGGLA
                     AEGMRPVVAIYSTFLQRGYDQLIHDIAIQQLPVTFAIDRAGVVGADGATHMGMFDLAYL
                     RCIPNLLLMCPADENECRQMLHTALNHSGPAAVRYPRGSGPGVLPQREMAALPLGKAQV
                     RRIGRRIAILAFGSMVAPALEVGVRLDATVVNMRFVKPLDVGLLKRLARTHETLVTVEE
                     GSIAGGAGSACLECLSAAGIAVNSLLLGFPDNFVEHGEPAELLATCGLDADGIENAIVS
                     FVTPPVAKFVADVGSFTDESEAFVRENMRIYRGERP"
     gene            complement(4041..4580)
                     /locus_tag="SOD_c20780"
     CDS             complement(4041..4580)
                     /codon_start=1
                     /locus_tag="SOD_c20780"
                     /product="hypothetical protein"
                     /protein_id="AGO55052.1"
                     /transl_table=11
                     /translation="MEEMLILVDDKDNPIRSEGKFSVHQQGLLHRAFSIFIFDNKGRWL
                     LQQRAFSKYHSAGLWTNSCCGHPRWGEATDAAAQRRLQEEMGFLTPLKKVSSFTYHAEV
                     PGNLIEHEFDHIYVGLFEGEPDINPDEVENSRWIDIIPLLHEVELHPEKFTTWFRLIIK
                     NFDTNEITRWEKLASR"
ORIGIN
        1 ctagcgccgc ccgtactgat ctgctctttc ccccacctgc caccaccagg cgatggtcgg
       61 gatgtcgatc ggctctgaca gctcgttgcc ccttgcttgc cgggtgaatc ctgaagcggt
      121 ataagccagc ctgcctgatg tcgtcccatc aataaatcga taacgttggg tttcctgaca
      181 ccacaagatc ccgccaatgg tatattcttc cagcgcatca atataaattt cggctccttt
      241 gtcatgcggt ccatttaata cttcatcacg cagctcgaca aaacgcatca gcatacggtc
      301 ctgcatattg aaggccattg ccattgcggc ttcgacagaa aggttatggg tgtccatcag
      361 aacatcgatg atgttatacc catcggcagt acgttccgcc tccttgaagt aggaatagca
      421 atcacttgac cagttgacca cggtacgggc cagttccatc aacgcattga cacgtctgtc
      481 gaacagcaaa cccggcccca attccaaccc gttggcgatc tgcgtattga gcataaatgt
      541 gggggtagcg ccagtatgca tgcgggtcac cacataatca ctcaggttag ggcgtatccc
      601 gcgtgccacg ttcgatgctt tctggatttc gatgaaaaac caatgtcgga ccgaatccac
      661 ccactggttg gcaagatagt caggtgacaa ttggcgaacg cgttgcagaa tatcccgcat
      721 ggccaccgca tagcggtcat ttttatcgac tatgatgtcg tggcattcca gtgcgcgaat
      781 agttctgaaa gcgctgtccg ccatttccat cggtttgtca cgagttgggc cttcatcgca
      841 aaattcatcg tcccaggtaa aagcaatcat cgccagatcg gctcccaatt gcagttgctc
      901 ggcattgggg gccaaggtat agacatagcc tgcaatcccc ccgcaatcct gtccgtacag
      961 acgctggcgc tgttcttcag tccagtaaag acggtaacgc tccatgaaat cgagcgcttt
     1021 cttttcaact tcggctttca ggggatgcac tttgtactgc cggttgaagg gattatagtc
     1081 aggcacaata tgcatgacgg gttgggacgt cagcatcggt tgggcctcgg gagacaaaaa
     1141 atcatttgtg ttcatactgt tccccatcat tgaatattat gacgttaact gatgattatt
     1201 ttttgcaggc aatcacgctg taagtagaaa ccttgttttt cagcagcgcc accgaccagt
     1261 tttccgccag cacccgcagc tcctccagcg cgccgtcaac ccccgtgggg aaatgacgct
     1321 cgatattggc tttggagtcc atcagccagt gcgctacgtc aacgtttgac ggcaatacgc
     1381 gaaaatcctt tatggtgaaa ccgctgtctt ccagcacctg gctaaagtaa gccggcgttt
     1441 tttgatggcg gcaggccaga cgatcaacaa tatccggcgt atcggactgg tagcgatccg
     1501 gttcgacgtt gtacaggttg tcggagatga tcaccttgcc accgggccgc acccgggtga
     1561 ataacgcgcg catggctttc tcatacagct cgttggggaa gtgagagatg acgccgcgga
     1621 tgatcaccag atcataaaga tcatcaggat ccggcaacag tccgatgtcc tgcgcattgc
     1681 acaaaaacag attgatgcgg ccgctcaacc cttgctcggc atgggagcgg gcgcagtagt
     1741 tgagctgctg ggcgctgacg ttaacgccgt ccaaccgctg gcattccgga taacgctccg
     1801 ccagatgctt gaggatgtaa ccccagccgc agccgatatc cagaatacgg tgcatcgccg
     1861 gccgatcgct gccggttacc ccggccagaa acaactgctg ctcgaaataa cggacactgg
     1921 actcatccag cccagcggtg ggcttcagtt tcgacgtcgg cgtcagggca ggggcatgag
     1981 ccgcatcctc atacacgcca aactgaaaca acagcgtatc gccgatggcc ttgcgccaat
     2041 gttccggttc ttcgcagtag gtctgtacca ccttctcctc atagctgtcg gtatggctat
     2101 cccggatcac ctgatacggc agattttgta aatacaccgg atcgggtgac atcatttcag
     2161 acagattgct catggtcgct ctcctcgata aatgcgcatg ttttcgcgta caaaagcttc
     2221 actttcatcg gtaaaactcc ccacgtcggc aacaaacttc gccaccggcg gtgtaacaaa
     2281 gctgacaatg gcgttttcga tgccgtcggc gtccagaccg caagtcgcca gcagctctgc
     2341 cggctcgccg tgctcgacaa aattatccgg aaagcccagc aacaagctgt ttaccgcgat
     2401 accggcggcg gacaggcatt ccaggcaggc gctccccgcg ccgccggcga tgctgccttc
     2461 ttctaccgtg accagcgttt catgggtacg cgccaggcgc ttcagcagcc caacgtcgag
     2521 cggtttgacg aagcgcatat tgaccacggt cgcatccagt cggacgccga cttccagcgc
     2581 aggcgcgacc atagagccga aggccagaat ggcgatccgc cgcccaatgc ggcgaacctg
     2641 agcttttccc aacggcaacg ccgccatctc gcgctgcggc agcacgccgg ggccactgcc
     2701 gcgcggataa cgtaccgccg ccgggccgct atgattcagc gcggtatgca gcatttgccg
     2761 gcactcattt tcatccgccg ggcacatcag cagcagattg ggaatgcagc gcagataagc
     2821 cagatcgaac atgcccatat gggtcgcgcc atcggcccct accacgccgg cgcgatcgat
     2881 ggcgaaggtt accggcagtt gctggatggc gatgtcgtgg ataagttggt cataaccgcg
     2941 ttgcaggaag gtagagtaaa tcgccactac cggccgcatg ccttcggcgg cgaggccgcc
     3001 ggcaaaggtc accgcatgtt gttcggcgat gccgacgtcg aaatagcgat cgggaaagcg
     3061 ctgctgaaag gtcaccaggc cggaaccttc acgcatcgcc ggggtaatgc cgaccacgcg
     3121 cgcgtcgtgc tctgcctcgt cgcataacca gtcgccgaat acccgcgtat aggtcagctt
     3181 accggcggcg gtgggcaata tcccggcctg tggacaaaat ttggccggcg catggtagtt
     3241 cacggggtcg gcctcggcgt gcgaaaagcc ttggccctta cgggtgatga catgcagcaa
     3301 ctgcaccccg cgccgatcgc gcattcgctc cagagccggg atcagcgttg ccagatcgtg
     3361 accgtcaacc ggccccgagt agtcaaagcc caaggtgctg aacagtgacg cagactcacc
     3421 gccatgtaga gcgacgagat gctgtttcag cgcgccgacc gatggcgaga tcgacatgtc
     3481 gttatcgttg aggatcacca gtaagggcag gtccggatcg agcgtggcgt tgttcatcgc
     3541 ctcaaaggcc agaccggcac tgagcgctcc gtcaccaatg accgcgatgc aacgccgggc
     3601 ctgccgctgc agccgggcgg cgtgtgccat ccccagcgcg gcggagattg acgtgctgga
     3661 atgtgcggtg ccgaagctgt cataggggga ttcgtcccgt cttggaaagc cggaaatgcc
     3721 gcccttgtga cgcaggttgc tcatctgtcc gcgtctgccg gtaatcgctt tgtgcggata
     3781 acattgatga ccgacgtccc agacaatgcg atcgtttggc gtatcaaaga cataatgcag
     3841 cgccagggtt aattccacca cgccgagatt agaggctaaa tgaccaccgc tttttgcaat
     3901 gctggataat aaaaatgccc ggagttcatg tgcagcctgt gctaattgct cacgggttaa
     3961 tttccgcaaa tcaatcggaa aattaattaa ttccaataag gtatccatag ccattcacca
     4021 gtcgtttaat gtggatagca ttaacgggat gcaagctttt cccatcgtgt tatttcattg
     4081 gtatcaaaat tttttattat taacctgaac caggtggtga atttttccgg atgcaattca
     4141 acctcatgca ataacgggat aatatcaatc catcgcgaat tttccacttc gtcaggatta
     4201 atatcaggct caccttcaaa caacccaaca taaatatggt cgaactcgtg ttcaatcaaa
     4261 tttccaggta cttcagcatg ataggtaaag ctggagacct ttttcaatgg ggtgagaaac
     4321 cccatttctt cctgtaaacg ccgctgggcg gcagcatcgg tcgcctcacc ccagcgcgga
     4381 tggccgcagc aactgttggt ccacaatccg gccgaatggt atttgctgaa cgctctttgt
     4441 tgcagcagcc atcttccttt gttatcaaat ataaagatcg aaaatgcacg atgtaatagc
     4501 ccttgctgat gaacagagaa ttttccctcc gaacggatag gattatcttt gtcatcaacg
     4561 aggatcagca tttcttccac
//
