BGC0001398: phomopsin A biosynthetic gene cluster from Phomopsis leptostromiformis
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Location: 1 - 65,569 nt. (total: 65,569 nt).
This entry is originally from NCBI GenBank LC646903.1.

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core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
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Gene details
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General
Compounds
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General information about the BGC
MIBiG accession BGC0001398
Short description phomopsin A biosynthetic gene cluster from Phomopsis leptostromiformis
Status Minimal annotation: yes
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: Unknown
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • RiPP
Loci NCBI GenBank: LC646903.1
Compounds
  • phomopsin A
  • phomopsin B
  • phomopsin E
Species Phomopsis leptostromiformis [taxonomy]
References
Chemical products information
phomopsin A
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Chemical database entries
NPAtlas
phomopsin B
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Chemical database entries
NPAtlas
phomopsin E
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Chemical database entries
NPAtlas
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • BDA39134.1
  • phomC
 5000 - 5569 (+) cupin family protein
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  • BDA39135.1
  • phomD
 9209 - 10618 (+) transcriptional regulator
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  • BDA39136.1
  • phomT
 12450 - 14237 (-) MFS transporter
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  • BDA39137.1
  • phomE
 15254 - 16905 (-) flavin-dependent monooxygenase
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  • BDA39138.1
  • phomF
 18075 - 19155 (+) short chain dehydrogenase/reductase
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  • BDA39139.1
  • phomYa
 22659 - 23768 (+) DUF3328
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  • BDA39140.1
  • phomP1
 23985 - 26250 (-) peptidase family S41
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  • BDA39141.1
  • phomYb
 26773 - 27670 (+) DUF3328
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  • BDA39142.1
  • phomA
 28344 - 28958 (-) precursor protein
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  • BDA39143.1
  • phomR
 30744 - 32997 (-) transcriptional regulator
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  • BDA39144.1
  • phomO
 36849 - 42318 (+) ABC transporter
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  • BDA39145.1
  • phomM
 42886 - 44049 (-) methyltransferase
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  • BDA39146.1
  • phomB
 44647 - 45675 (+) hypothetical protein
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  • BDA39147.1
  • phomP2
 45977 - 48569 (-) oligopeptide transporter
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  • BDA39148.1
  • phomYc
 48980 - 49947 (+) DUF3328
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  • BDA39149.1
  • phomQ1
 51341 - 52660 (-) tyrosinase
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  • BDA39150.1
  • phomQ2
 53056 - 54556 (+) tyrosinase
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  • BDA39151.1
  • phomYd
 55055 - 56327 (+) DUF3328
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  • BDA39152.1
  • phomYe
 56736 - 57593 (+) DUF3328
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  • BDA39153.1
  • phomG
 58189 - 60569 (+) peptidase M3
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  • BDA39154.1
  • orf-1
 61990 - 64171 (+) oxidoreductase
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Annotation changelog
MIBiG version Submitter Notes
3.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Entry added
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