BGC0001509: anikasin biosynthetic gene cluster from Pseudomonas fluorescens
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 116,447 - 161,212 nt. (total: 44,766 nt).
This entry is originally from NCBI GenBank NZ_LVEJ01000013.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
Biosynthesis
History
NRPS/PKS domains
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0001509
Short description anikasin biosynthetic gene cluster from Pseudomonas fluorescens
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • NRPS (Type I)
Loci
NZ_LVEJ01000013.1
116447 - 161212
via
Compounds
  • anikasin
Species Pseudomonas fluorescens [taxonomy]
References
Chemical products information
anikasin Evidence:
(no structure information available)
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • A8O26_RS13955
  • WP_064118557.1
116447 - 118405 (-) MacB family efflux pump subunit
    copy AA seq
    copy Nt seq
    • A8O26_RS13960
    • WP_064118558.1
    • macA
    118408 - 119556 (-) macrolide transporter subunit MacA
      copy AA seq
      copy Nt seq
      • A8O26_RS13965
      • WP_064118559.1
      119623 - 137451 (-) non-ribosomal peptide synthase/polyketide synthase
        copy AA seq
        copy Nt seq
        • A8O26_RS13970
        • WP_064118560.1
        137448 - 150464 (-) non-ribosomal peptide synthetase
          copy AA seq
          copy Nt seq
          • A8O26_RS13975
          • WP_064118561.1
          150721 - 157131 (-) non-ribosomal peptide synthetase
            copy AA seq
            copy Nt seq
            • A8O26_RS13980
            • WP_064118562.1
            157608 - 158402 (+) helix-turn-helix transcriptional regulator
              copy AA seq
              copy Nt seq
              • A8O26_RS13985
              • WP_064118563.1
              158577 - 159971 (+) efflux transporter outer membrane subunit
                copy AA seq
                copy Nt seq
                • A8O26_RS13990
                • WP_008079652.1
                160128 - 160733 (+) SCO family protein
                  copy AA seq
                  copy Nt seq
                  • A8O26_RS13995
                  • WP_064118564.1
                  160733 - 161212 (+) copper chaperone PCu(A)C
                    copy AA seq
                    copy Nt seq
                    Biosynthesis information

                    Biosynthetic modules

                    Name
                    Unk01
                    Type
                    nrps-type1
                    Genes
                    A8O26_RS13965
                    Substrates
                    leucine (evidence: Structure-based inference, Mass spectrometry)
                    Integrated Monomers
                    Domains
                    adenylation
                    Name
                    Unk02
                    Type
                    nrps-type1
                    Genes
                    A8O26_RS13965
                    Substrates
                    alanine (evidence: Structure-based inference, Mass spectrometry)
                    Integrated Monomers
                    Domains
                    adenylation
                    Name
                    Unk03
                    Type
                    nrps-type1
                    Genes
                    A8O26_RS13965
                    Substrates
                    threonine (evidence: Structure-based inference, Mass spectrometry)
                    Integrated Monomers
                    Domains
                    adenylation
                    Name
                    Unk04
                    Type
                    nrps-type1
                    Genes
                    A8O26_RS13965
                    Substrates
                    leucine (evidence: Structure-based inference, Mass spectrometry)
                    Integrated Monomers
                    Domains
                    adenylation
                    Name
                    Unk05
                    Type
                    nrps-type1
                    Genes
                    A8O26_RS13965
                    Substrates
                    leucine (evidence: Structure-based inference, Mass spectrometry)
                    Integrated Monomers
                    Domains
                    adenylation
                    Name
                    Unk06
                    Type
                    nrps-type1
                    Genes
                    A8O26_RS13970
                    Substrates
                    serine (evidence: Structure-based inference, Mass spectrometry)
                    Integrated Monomers
                    Domains
                    adenylation
                    Name
                    Unk07
                    Type
                    nrps-type1
                    Genes
                    A8O26_RS13970
                    Substrates
                    leucine (evidence: Structure-based inference, Mass spectrometry)
                    Integrated Monomers
                    Domains
                    adenylation
                    Name
                    Unk08
                    Type
                    nrps-type1
                    Genes
                    A8O26_RS13970
                    Substrates
                    serine (evidence: Structure-based inference, Mass spectrometry)
                    Integrated Monomers
                    Domains
                    adenylation
                    Name
                    Unk09
                    Type
                    nrps-type1
                    Genes
                    A8O26_RS13970
                    Substrates
                    leucine (evidence: Structure-based inference, Mass spectrometry)
                    Integrated Monomers
                    Domains
                    adenylation
                    Name
                    Unk10
                    Type
                    nrps-type1
                    Genes
                    A8O26_RS13975
                    Substrates
                    isoleucine (evidence: Structure-based inference, Mass spectrometry)
                    Integrated Monomers
                    Domains
                    adenylation
                    Name
                    Unk11
                    Type
                    nrps-type1
                    Genes
                    A8O26_RS13975
                    Substrates
                    aspartic acid (evidence: Structure-based inference, Mass spectrometry)
                    Integrated Monomers
                    Domains
                    adenylation
                    Annotation changelog

                    Entry version: 4

                    Date
                    Changes
                    Submitters
                    Reviewers
                    Update chemical activity to schema version 2.11
                    • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                    • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                    Entry version: 3

                    Date
                    Changes
                    Submitters
                    Reviewers
                    Updated bioactivity data
                    • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                    • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                    Added NRP substrate specificities
                    • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                    • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                    Entry version: 2

                    Date
                    Changes
                    Submitters
                    Reviewers
                    Migrated from v1.4
                    • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                    • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                    Entry version: 1

                    Date
                    Changes
                    Submitters
                    Reviewers
                    Submitted
                    • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                    • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                    Detailed domain annotation
                    Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
                    A domain glossary is available here, and an explanation of the visualisation is available here.
                    Selected features only
                    Show module domains
                    Similar known gene clusters from MIBiG 4.0
                    Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
                    Click on reference genes to show details of similarities to genes within the current region.
                    Click on an accession to open that entry in the MiBIG database.