BGC0001558 - Region 1 - PKS-like,T2PKS,oligosaccharide
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
More detailed help is available here.
Download region SVG
Location: 1 - 54,271 nt. (total: 54,271 nt)
Show pHMM detection rules used
Region on contig edge.
T2PKS: (t2ks and t2clf)
oligosaccharide: (minimum(3, [DUF1205, Glyco_transf_28, Glycos_transf_1, Glycos_transf_2, MGT]) and minscore(MGT, 150))
PKS-like: (t2pks2 or ksIII)
oligosaccharide: (minimum(3, [DUF1205, Glyco_transf_28, Glycos_transf_1, Glycos_transf_2, MGT]) and minscore(MGT, 150))
PKS-like: (t2pks2 or ksIII)
Legend:
reset view
zoom to selection