BGC0001609 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

BGC0001609 (Trichoderma virens Gv29-8)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1	NRPS	1	30,121	gliovirin	NRPS:Type I	100%

BGC0001609 - Region 1 - NRPS

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Location: 1 - 30,121 nt. (total: 30,121 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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Gene details

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Gene overview

MIBiG

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

External annotation

Name		MIBiG
Version		4.0alpha

Type		Subregion
Location		1 - 30,122
Label		BGC0001609

Detailed domain annotation

Selected features only

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Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001609	1.00	NRP	gliovirin	Trichoderma virens Gv29-8
BGC0002736	0.32	Terpene	preaspterpenacid I	Aspergillus terreus NIH2624
BGC0001989	0.32	Other	pulcherrimin	Kluyveromyces lactis
BGC0002321	0.31	Other	pulcherriminic acid, pulcherrimin, cyclodileucine, compound 3	Metschnikowia aff. pulcherrima
BGC0000688	0.23	Terpene	copalyl diphosphate	Diaporthe amygdali
BGC0001775	0.23	Terpene	sespendole	Cordana terrestris
BGC0001604	0.23	Terpene	gibberellin	Fusarium fujikuroi
BGC0000676	0.22	Terpene	aphidicolin, aphidicolan-16β-ol, 3-deoxyaphidicolin, 17-deoxyaphidicolin	Phoma betae
BGC0000811	0.21	Alkaloid	fumigaclavine C	Aspergillus fumigatus Af293
BGC0001128	0.21	NRP	gamexpeptide C	Photorhabdus laumondii subsp. laumondii TTO1

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001609	1.00	NRP	gliovirin	Trichoderma virens Gv29-8
BGC0002736	0.65	Terpene	preaspterpenacid I	Aspergillus terreus NIH2624
BGC0001989	0.65	Other	pulcherrimin	Kluyveromyces lactis
BGC0002321	0.65	Other	pulcherriminic acid, pulcherrimin, cyclodileucine, compound 3	Metschnikowia aff. pulcherrima
BGC0000688	0.56	Terpene	copalyl diphosphate	Diaporthe amygdali
BGC0001775	0.56	Terpene	sespendole	Cordana terrestris
BGC0001604	0.56	Terpene	gibberellin	Fusarium fujikuroi
BGC0000676	0.55	Terpene	aphidicolin, aphidicolan-16β-ol, 3-deoxyaphidicolin, 17-deoxyaphidicolin	Phoma betae
BGC0000811	0.54	Alkaloid	fumigaclavine C	Aspergillus fumigatus Af293
BGC0001128	0.53	NRP	gamexpeptide C	Photorhabdus laumondii subsp. laumondii TTO1

Similar known gene clusters from MIBiG 4.0

Module view

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NRPS/PKS products

NRPS/PKS substrates

Predicted core structure(s)

For candidate cluster 1, location 606 - 30121:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (Ser)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS substrate predictions

TRIVIDRAFT_78708

Search NORINE for peptide: strict or relaxed

AMP-binding (13..403): Phe

nrpys: Phe

SVM prediction details:

Predicted physicochemical class:: hydrophilic (Arg, Asp, Glu, Asn, Lys, Gln, Orn, Aad)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAGALGACAK
Nearest Stachelhaus code(s):: Phe DAGALGACAK (97% 8Å match)
Stachelhaus code match:: 100% (strong)

AMP-binding (1047..1425): Ser

nrpys: Ser

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic (Phe, Tyr, diOH-Bz, Ph-Gly, bOH-Tyr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DYNTYTAICK
Nearest Stachelhaus code(s):: Ser DYNTYTAICK (88% 8Å match)
Stachelhaus code match:: 100% (strong)