Search NORINE for peptide: strict or relaxed

AMP-binding (611..1006): Leu

nrpys: Leu

SVM prediction details:

Predicted physicochemical class:

N/A

Large clusters prediction:

Aromatic side chain (Phe, Trp, Ph-Gly, Tyr, bOH-Tyr)

Small clusters prediction:

N/A

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DAWCIGAVCK

Nearest Stachelhaus code(s):

Leu DAWCIGAVCK (100% 8Å match)

Stachelhaus code match:

100% (strong)

AMP-binding (1684..2075): Ala

nrpys: Ala

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)

Large clusters prediction:

Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)

Small clusters prediction:

Tiny, hydrophilic, transition to aliphatic (Gly, Ala)

Single AA prediction:

ala (Ala)

Stachelhaus prediction details:

Stachelhaus sequence:

DLFNNALTYK

Nearest Stachelhaus code(s):

Ala DLFNNALTYK (100% 8Å match)

Gly DLFNNALTYK (79% 8Å match)

Stachelhaus code match:

100% (strong)

AMP-binding (2733..3128): Leu

nrpys: Leu

SVM prediction details:

Predicted physicochemical class:

N/A

Large clusters prediction:

Aromatic side chain (Phe, Trp, Ph-Gly, Tyr, bOH-Tyr)

Small clusters prediction:

N/A

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DAWCIGAVCK

Nearest Stachelhaus code(s):

Leu DAWCIGAVCK (100% 8Å match)

Stachelhaus code match:

100% (strong)

AMP-binding (3804..4192): Val

nrpys: Val

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)

Large clusters prediction:

Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)

Small clusters prediction:

Aliphatic, branched hydrophobic (Val, Leu, Ile, Abu, Ival)

Single AA prediction:

val (Val)

Stachelhaus prediction details:

Stachelhaus sequence:

DAFWIGATFK

Nearest Stachelhaus code(s):

Val DAFWIGATFK (100% 8Å match)

Ile or Val DAFWIGATFK (94% 8Å match)

Stachelhaus code match:

100% (strong)

AMP-binding (4849..5244): Tyr

nrpys: Tyr

SVM prediction details:

Predicted physicochemical class:

N/A

Large clusters prediction:

N/A

Small clusters prediction:

Aliphatic, branched hydrophobic (Val, Leu, Ile, Abu, Ival)

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DASFIADVCK

Nearest Stachelhaus code(s):

Tyr DASFIADVCK (100% 8Å match)

Stachelhaus code match:

100% (strong)

AMP-binding (5920..6315): Leu

nrpys: Leu

SVM prediction details:

Predicted physicochemical class:

N/A

Large clusters prediction:

Aromatic side chain (Phe, Trp, Ph-Gly, Tyr, bOH-Tyr)

Small clusters prediction:

N/A

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DAWCIGAVCK

Nearest Stachelhaus code(s):

Leu DAWCIGAVCK (100% 8Å match)

Stachelhaus code match:

100% (strong)

AMP-binding (6972..7367): Val

nrpys: Val

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)

Large clusters prediction:

Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)

Small clusters prediction:

Aliphatic, branched hydrophobic (Val, Leu, Ile, Abu, Ival)

Single AA prediction:

val (Val)

Stachelhaus prediction details:

Stachelhaus sequence:

DAFWIGGTFK

Nearest Stachelhaus code(s):

Val DAFWIGGTFK (100% 8Å match)

Stachelhaus code match:

100% (strong)

AMP-binding (8043..8448): Thr

nrpys: Thr

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)

Large clusters prediction:

Aliphatic chain or phenyl group with -OH (Ser, Thr, Dhpg, Hpg)

Small clusters prediction:

thr (Thr)

Single AA prediction:

thr (Thr)

Stachelhaus prediction details:

Stachelhaus sequence:

DFWNIGMVHK

Nearest Stachelhaus code(s):

Thr DFWNIGMVHK (100% 8Å match)

Stachelhaus code match:

100% (strong)

AMP-binding (9124..9519): Val

nrpys: Val

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)

Large clusters prediction:

Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)

Small clusters prediction:

Aliphatic, branched hydrophobic (Val, Leu, Ile, Abu, Ival)

Single AA prediction:

val (Val)

Stachelhaus prediction details:

Stachelhaus sequence:

DAFWIGGTFK

Nearest Stachelhaus code(s):

Val DAFWIGGTFK (100% 8Å match)

Stachelhaus code match:

100% (strong)

AMP-binding (10176..10571): Leu

nrpys: Leu

SVM prediction details:

Predicted physicochemical class:

N/A

Large clusters prediction:

Aromatic side chain (Phe, Trp, Ph-Gly, Tyr, bOH-Tyr)

Small clusters prediction:

N/A

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DAWCIGAVCK

Nearest Stachelhaus code(s):

Leu DAWCIGAVCK (100% 8Å match)

Stachelhaus code match:

100% (strong)

AMP-binding (11247..11642): Val

nrpys: Val

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)

Large clusters prediction:

Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)

Small clusters prediction:

Aliphatic, branched hydrophobic (Val, Leu, Ile, Abu, Ival)

Single AA prediction:

val (Val)

Stachelhaus prediction details:

Stachelhaus sequence:

DAFWIGGTFK

Nearest Stachelhaus code(s):

Val DAFWIGGTFK (100% 8Å match)

Stachelhaus code match:

100% (strong)

AMP-binding (12299..12704): Thr

nrpys: Thr

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)

Large clusters prediction:

Aliphatic chain or phenyl group with -OH (Ser, Thr, Dhpg, Hpg)

Small clusters prediction:

thr (Thr)

Single AA prediction:

thr (Thr)

Stachelhaus prediction details:

Stachelhaus sequence:

DFWNIGMVHK

Nearest Stachelhaus code(s):

Thr DFWNIGMVHK (100% 8Å match)

Stachelhaus code match:

100% (strong)

AMP-binding (13380..13775): Leu

nrpys: Leu

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aromatic (Phe, Tyr, diOH-Bz, Ph-Gly, bOH-Tyr)

Large clusters prediction:

Aromatic side chain (Phe, Trp, Ph-Gly, Tyr, bOH-Tyr)

Small clusters prediction:

N/A

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DAWCIGAVCK

Nearest Stachelhaus code(s):

Leu DAWCIGAVCK (100% 8Å match)

Stachelhaus code match:

100% (strong)

AMP-binding (14432..14827): Val

nrpys: Val

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)

Large clusters prediction:

Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)

Small clusters prediction:

Aliphatic, branched hydrophobic (Val, Leu, Ile, Abu, Ival)

Single AA prediction:

val (Val)

Stachelhaus prediction details:

Stachelhaus sequence:

DAFWIGGTFK

Nearest Stachelhaus code(s):

Val DAFWIGGTFK (100% 8Å match)

Stachelhaus code match:

100% (strong)

AMP-binding (15503..15898): Val

nrpys: Val

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)

Large clusters prediction:

Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)

Small clusters prediction:

Aliphatic, branched hydrophobic (Val, Leu, Ile, Abu, Ival)

Single AA prediction:

val (Val)

Stachelhaus prediction details:

Stachelhaus sequence:

DAFWIGGTFK

Nearest Stachelhaus code(s):

Val DAFWIGGTFK (100% 8Å match)

Stachelhaus code match:

100% (strong)