BGC0001654: lipooligosaccharide biosynthetic gene cluster from Bacteroides thetaiotaomicron VPI-5482
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Location: 4,337,976 - 4,357,778 nt. (total: 19,803 nt).
This entry is originally from NCBI GenBank AE015928.1.

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core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
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Gene details
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General
Compounds
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KnownClusterBlast
General information about the BGC
MIBiG accession BGC0001654
Short description lipooligosaccharide biosynthetic gene cluster from Bacteroides thetaiotaomicron VPI-5482
Status Minimal annotation: yes
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: Unknown
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • Saccharide
Loci NCBI GenBank: AE015928.1
Compounds
  • lipooligosaccharide
Species Bacteroides thetaiotaomicron VPI-5482 [taxonomy]
References
Chemical products information
lipooligosaccharide
(no structure information available)
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • BT_3363
  • AAO78469.1
 4337976 - 4338950 (+) lipopolysaccharide core biosynthesis protein LpsA
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  • BT_3364
  • AAO78470.1
 4338991 - 4339734 (+) Tyrosine protein kinase, active site
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  • BT_3365
  • AAO78471.1
 4339755 - 4341794 (+) glycoside transferase family 2
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  • BT_3366
  • AAO78472.1
 4341957 - 4342967 (+) glycoside transferase family 2
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  • BT_3367
  • AAO78473.1
 4343047 - 4344210 (+) glycoside transferase family 4
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  • BT_3368
  • AAO78474.1
 4344314 - 4345477 (+) glycoside transferase family 4
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  • BT_3369
  • AAO78475.1
 4345482 - 4346723 (-) glycoside transferase family 4
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  • BT_3370
  • AAO78476.1
 4346856 - 4347845 (+) glycoside transferase family 2
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  • BT_3371
  • AAO78477.1
 4347835 - 4348824 (+) glycoside transferase family 2
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  • BT_3372
  • AAO78478.1
 4348877 - 4349857 (-) glycoside transferase family 2
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  • BT_3373
  • AAO78479.1
 4349864 - 4350307 (-) spermidine n1-acetyltransferase
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  • BT_3374
  • AAO78480.1
 4350311 - 4351495 (-) putative carbamoyl-phosphate-synthetase
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  • BT_3375
  • AAO78481.1
 4351512 - 4352672 (-) aspartate aminotransferase
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  • BT_3376
  • AAO78482.1
 4352674 - 4353783 (-) nucleotide sugar transaminase
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  • BT_3377
  • AAO78483.1
 4353938 - 4354906 (+) glycoside transferase family 14
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  • BT_3378
  • AAO78484.1
 4355126 - 4355506 (+) GtrA-like protein
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  • BT_3379
  • AAO78485.1
 4355503 - 4356438 (+) glycoside transferase family 2
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  • BT_3380
  • AAO78486.1
 4356447 - 4357778 (+) putative membrane protein
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Annotation changelog
MIBiG version Submitter Notes
1.4
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Submitted
2.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Migrated from v1.4
3.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Updated bioactivity data
3.1
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Update chemical activity to schema version 2.11
Similar known gene clusters
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