BGC0001705: nodularin biosynthetic gene cluster from Nostoc sp. CENA543
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 1 - 48,240 nt. (total: 48,240 nt).
This entry is originally from NCBI GenBank MF668122.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
NRP
History
NRPS/PKS domains
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0001705
Short description nodularin biosynthetic gene cluster from Nostoc sp. CENA543
Status Minimal annotation: no
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: Unknown
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • NRP
  • Polyketide
Loci NCBI GenBank: MF668122.1
Compounds
  • nodularin
Species Nostoc sp. CENA543 [taxonomy]
References
Chemical products information
nodularin
Copy SMILES
C41H60N8O10
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • ATP76236.1
  • ndaI
1 - 1821 (-) NdaI
copy AA seq
copy Nt seq
  • ATP76237.1
  • ndaH
2222 - 3232 (-) NdaH
copy AA seq
copy Nt seq
  • ATP76238.1
  • ndaG
3244 - 4041 (-) NdaG
copy AA seq
copy Nt seq
  • ATP76239.1
  • ndaF
4083 - 14534 (-) NdaF
copy AA seq
copy Nt seq
  • ATP76240.1
  • ndaE
14571 - 15500 (-) NdaE
copy AA seq
copy Nt seq
  • ATP76241.1
  • ndaD
15563 - 27274 (-) NdaD
copy AA seq
copy Nt seq
  • ATP76242.1
  • ndaC
27314 - 35272 (-) NdaC
copy AA seq
copy Nt seq
  • ATP76243.1
  • ndaA
36499 - 44382 (+) NdaA
copy AA seq
copy Nt seq
  • ATP76244.1
  • ndaB
44386 - 48240 (+) NdaB
copy AA seq
copy Nt seq
NRP-specific information
Subclass N/A
Cyclic? no
NRP-synthases
Gene Modules
ndaF
Module ?
Specificity: glutamic acid
Evidence for specificity:
  • Structure-based inference
  • Sequence-based prediction
  • Mass spectrometry
ndaA
Module ?
Specificity: threonine
Evidence for specificity:
  • Structure-based inference
  • Sequence-based prediction
  • Mass spectrometry
Module ?
Specificity: 3R-methyl-D-aspartic acid branched
Evidence for specificity:
  • Structure-based inference
  • Sequence-based prediction
  • Mass spectrometry
ndaB
Module ?
Specificity: arginine
Evidence for specificity:
  • Structure-based inference
  • Sequence-based prediction
  • Mass spectrometry
Annotation changelog
MIBiG version Submitter Notes
1.4
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Submitted
2.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Migrated from v1.4
3.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Added NRP substrate specificities
Detailed domain annotation
Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
A glossary is available here.
Selected features only
Show module domains
Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.