BGC0001756 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

BGC0001756 (Arabidopsis thaliana (thale cress))

Region	Type	From	To	Similarity Confidence	Most similar known cluster
Region 1	terpene	1	42,315	High	astallatene	terpene

BGC0001756 - Region 1 - terpene

Download region GenBank file

Download region SVG

Location: 1 - 42,315 nt. (total: 42,315 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (PT_phytoene_like or phytoene_synt or Lycopene_cycl or Lycopene_cycl_fung or T1TS or T1TS_KS or T2TS or TS_UbiA or TS_Pyr4)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

MIBiG

Tailoring

MIBiG comparison

KnownClusterBlast

Terpene

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

External annotation

Name		MIBiG
Version		4.0alpha

Type		Subregion
Location		1 - 42,316
Label		BGC0001756

Tailoring functions

Ligases: synthetase

AT3G14510: Polyprenyl synthetase

smcogs: SMCOG1182: Polyprenyl synthetase

AT3G14530: Polyprenyl synthetase

smcogs: SMCOG1182: Polyprenyl synthetase

AT3G14550: Polyprenyl synthetase

smcogs: SMCOG1182: Polyprenyl synthetase

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001756.3	0.95	terpene	retigeranin, arathanatriene	Arabidopsis thaliana
BGC0002397.2	0.84	terpene	astallatene	Arabidopsis thaliana
BGC0002723.2	0.69	terpene	casbene	Jatropha curcas
BGC0002398.2	0.66	terpene	(-)-ent-quiannulatene	Arabidopsis thaliana
BGC0002400.2	0.64	terpene	boleracene	Brassica oleracea var. oleracea
BGC0002309.2	0.52	terpene	cattleyene	Streptomyces cattleya NRRL 8057 = DSM 46488
BGC0002724.2	0.44	terpene	casbene	Jatropha curcas
BGC0000640.3	0.41	terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0000630.3	0.40	terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis
BGC0000286.3	0.39	PKS	viguiepinol	Streptomyces sp. KO-3988

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001756.3	0.95	terpene	retigeranin, arathanatriene	Arabidopsis thaliana
BGC0002397.2	0.84	terpene	astallatene	Arabidopsis thaliana
BGC0002723.2	0.69	terpene	casbene	Jatropha curcas
BGC0002398.2	0.66	terpene	(-)-ent-quiannulatene	Arabidopsis thaliana
BGC0002400.2	0.64	terpene	boleracene	Brassica oleracea var. oleracea
BGC0002309.2	0.52	terpene	cattleyene	Streptomyces cattleya NRRL 8057 = DSM 46488
BGC0002724.2	0.44	terpene	casbene	Jatropha curcas
BGC0000640.3	0.41	terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0000630.3	0.40	terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis
BGC0000286.3	0.39	PKS	viguiepinol	Streptomyces sp. KO-3988

Similar known clusters from MIBiG 4.0

Detailed terpene predictions

Product predictions:

No product predictions

Genes with terpene domains:

AT3G14510: PT_FPPS_like

Domain 1 (17 - 283): Prenyltransferase; Farnesyl diphosphate synthase like

Subtype: Geranylgeranyl diphosphate synthase or geranylfarnesyl diphosphate synthase, bacterial or Farnesyl diphosphate synthase, bacterial

AT3G14530: PT_FPPS_like

Domain 1 (92 - 359): Prenyltransferase; Farnesyl diphosphate synthase like

Subtype: Geranylgeranyl diphosphate synthase or geranylfarnesyl diphosphate synthase, bacterial or Farnesyl diphosphate synthase, bacterial

AT3G14550: PT_FPPS_like

Domain 1 (93 - 359): Prenyltransferase; Farnesyl diphosphate synthase like

Subtype: Geranylgeranyl diphosphate synthase or geranylfarnesyl diphosphate synthase, bacterial or Farnesyl diphosphate synthase, bacterial

Terpene

Glossary

No acronyms to display