BGC0001793: swainsonine biosynthetic gene cluster from Chaetothyriaceae sp.
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
View antiSMASH-generated output
Download Cluster GenBank file
Download region SVG
Location: 1 - 22,998 nt. (total: 22,998 nt).
This entry is originally from NCBI GenBank KY365740.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
Biosynthesis
History
NRPS/PKS domains
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0001793
Short description swainsonine biosynthetic gene cluster from Chaetothyriaceae sp.
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • NRPS (Type I)
  • PKS (Unknown)
Loci
KY365740.1
via
Compounds
  • swainsonine
Species Chaetothyriaceae sp. [taxonomy]
References
Chemical products information
swainsonine Evidence:
Copy SMILES
C8H15N1O3
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • AQV04223.1
  • swnA
 539 - 2059 (-) putative aminotransferase
    copy AA seq
    copy Nt seq
    • AQV04219.1
    • swnH1
    		 3005 - 4002 (-) SwnH1
      copy AA seq
      copy Nt seq
      • swnT
      		 6142 - 7446 (+)
        copy AA seq
        copy Nt seq
        • AQV04220.1
        • swnH2
        		 7610 - 8634 (-) SwnH2
          copy AA seq
          copy Nt seq
          • AQV04224.1
          • swnK
          		 10624 - 18126 (+) SwnK
            copy AA seq
            copy Nt seq
            • AQV04222.1
            • swnR
            		 18447 - 19373 (-) SwnR
              copy AA seq
              copy Nt seq
              • AQV04221.1
              • swnN
              		 20237 - 21374 (+) SwnN
                copy AA seq
                copy Nt seq
                Biosynthesis information

                Biosynthetic modules

                Name
                Unk01
                Type
                nrps-type1
                Genes
                swnK
                Substrates
                pipecolic acid (evidence: Structure-based inference, Homology)
                Integrated Monomers
                Domains
                adenylation
                Annotation changelog

                Entry version: next

                Date
                Changes
                Submitters
                Reviewers
                2024-07-24
                MIBiG v4 annotathon
                • (ID: 4CEPXXFDQQ46VQJXBT4B4AUO)
                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                Entry version: 3

                Date
                Changes
                Submitters
                Reviewers
                2022-09-15
                Fix biosynthetic classes
                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                2022-09-15
                Added NRP substrate specificities
                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                Entry version: 2

                Date
                Changes
                Submitters
                Reviewers
                2019-10-16
                Migrated from v1.4
                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                Entry version: 1

                Date
                Changes
                Submitters
                Reviewers
                2018-08-06
                Submitted
                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                Detailed domain annotation
                Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
                A domain glossary is available here, and an explanation of the visualisation is available here.
                Selected features only
                Show module domains
                Similar known gene clusters from MIBiG 4.0
                Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
                Click on reference genes to show details of similarities to genes within the current region.
                Click on an accession to open that entry in the MiBIG database.