BGC0001879: type R and F tailocins biosynthetic gene cluster from Pseudomonas fluorescens
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Location: 1,425 - 40,752 nt. (total: 39,328 nt).
This entry is originally from NCBI GenBank JTGH01000018.1.

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core biosynthetic genes
additional biosynthetic genes
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General
Compounds
Genes
Biosynthesis
History
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0001879
Short description type R and F tailocins biosynthetic gene cluster from Pseudomonas fluorescens
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: complete
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • other (other)
Loci
JTGH01000018.1
1425 - 40752
via Gene expression correlated with compound production
Compounds
  • type R and F tailocins
Species Pseudomonas fluorescens [taxonomy]
References
Chemical products information
type R and F tailocins Evidence: Total synthesis
(no structure information available)
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • QS95_21670
  • KIF57409.1
 1425 - 4007 (-) DNA mismatch repair protein MutS
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    • QS95_21675
    • KIF57410.1
    		 4217 - 4951 (+) transcriptional regulator
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      • QS95_21680
      • KIF57572.1
      		 5477 - 5893 (+) hypothetical protein
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        • QS95_21685
        • KIF57573.1
        		 6078 - 6476 (+) hypothetical protein
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          • QS95_21690
          • KIF57411.1
          		 6624 - 6962 (+) pyocin R2, holin
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            • QS95_21695
            • KIF57412.1
            		 7036 - 7557 (+) hypothetical protein
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              • QS95_21700
              • KIF57413.1
              		 7561 - 8169 (+) baseplate assembly protein
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                • QS95_21705
                • KIF57414.1
                		 8184 - 8516 (+) phage baseplate protein
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                  • QS95_21710
                  • KIF57415.1
                  		 8513 - 9508 (+) baseplate J protein
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                    • QS95_21715
                    • KIF57416.1
                    		 9505 - 10140 (+) tail protein
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                      • QS95_21730
                      • KIF57417.1
                      		 13163 - 13711 (+) hypothetical protein
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                        • QS95_21735
                        • KIF57418.1
                        		 13812 - 13997 (+) hypothetical protein
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                          • QS95_21740
                          • KIF57419.1
                          		 14000 - 15166 (+) tail protein
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                            • QS95_21745
                            • KIF57420.1
                            		 15166 - 15672 (+) phage tail protein
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                              • QS95_21750
                              • KIF57421.1
                              		 15772 - 16353 (+) hypothetical protein
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                                • QS95_21755
                                • KIF57422.1
                                		 16482 - 18743 (+) phage tape measure bacteriocin
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                                  • QS95_21760
                                  • KIF57423.1
                                  		 18740 - 19123 (+) phage-like protein
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                                    • QS95_21765
                                    • KIF57424.1
                                    		 19116 - 19328 (+) tail protein
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                                      • QS95_21770
                                      • KIF57425.1
                                      		 19338 - 20366 (+) phage-like tail protein
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                                        • QS95_21775
                                        • KIF57426.1
                                        		 20428 - 21012 (+) prophage PSSSM-04
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                                          • QS95_21780
                                          • KIF57427.1
                                          		 21009 - 21188 (+) hypothetical protein
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                                            • QS95_21785
                                            • KIF57428.1
                                            		 21188 - 22684 (+) tail sheath protein
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                                              • QS95_21790
                                              • KIF57429.1
                                              		 22752 - 23099 (+) phage tail protein
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                                                • QS95_21795
                                                • KIF57430.1
                                                		 23096 - 23392 (+) ArsR family transcriptional regulator
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                                                  • QS95_21800
                                                  • KIF57431.1
                                                  		 23523 - 25295 (+) tail protein
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                                                    • QS95_21805
                                                    • KIF57432.1
                                                    		 25282 - 26517 (+) 2-hydroxyacid dehydrogenase
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                                                      • QS95_21810
                                                      • KIF57433.1
                                                      		 26521 - 27558 (+) baseplate protein
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                                                        • QS95_21815
                                                        • KIF57434.1
                                                        		 27702 - 28211 (+) phage assembly protein
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                                                          • QS95_21820
                                                          • KIF57435.1
                                                          		 28211 - 28609 (+) phage GP46
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                                                            • QS95_21825
                                                            • KIF57436.1
                                                            		 28599 - 29642 (+) baseplate J protein
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                                                              • QS95_21830
                                                              • KIF57437.1
                                                              		 29630 - 30229 (+) phage tail protein
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                                                                • QS95_21835
                                                                • KIF57438.1
                                                                		 30244 - 30975 (+) hypothetical protein
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                                                                  • QS95_21840
                                                                  • KIF57439.1
                                                                  		 30977 - 31402 (+) Caudovirales tail fiber assembly protein
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                                                                    • QS95_21845
                                                                    • KIF57440.1
                                                                    		 31458 - 32552 (+) phage tail protein
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                                                                      • QS95_21850
                                                                      • KIF57441.1
                                                                      		 32560 - 33126 (+) phage tail protein
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                                                                        • QS95_21855
                                                                        • KIF57442.1
                                                                        		 33149 - 34072 (+) hypothetical protein
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                                                                          • QS95_21860
                                                                          • KIF57443.1
                                                                          		 34072 - 34539 (+) hypothetical protein
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                                                                            • QS95_21865
                                                                            • KIF57444.1
                                                                            		 34581 - 35501 (+) tail fiber protein
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                                                                              • QS95_21870
                                                                              • KIF57445.1
                                                                              		 35504 - 35944 (+) hypothetical protein
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                                                                                • QS95_21875
                                                                                • KIF57446.1
                                                                                		 35974 - 37176 (+) carbohydrate-binding protein CenC
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                                                                                  • QS95_21880
                                                                                  • KIF57447.1
                                                                                  		 37188 - 37430 (+) hypothetical protein
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                                                                                    • QS95_21885
                                                                                    • KIF57448.1
                                                                                    		 37487 - 38050 (+) lysozyme
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                                                                                      • QS95_21890
                                                                                      • KIF57449.1
                                                                                      		 38032 - 38562 (+) lysozyme
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                                                                                        • QS95_21895
                                                                                        • KIF57450.1
                                                                                        		 38631 - 39131 (+) damage-inducible protein CinA
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                                                                                          • QS95_21900
                                                                                          • KIF57451.1
                                                                                          		 39215 - 40273 (+) recombinase RecA
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                                                                                            • QS95_21905
                                                                                            • KIF57452.1
                                                                                            		 40282 - 40752 (+) recombinase RecX
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                                                                                              Biosynthesis information
                                                                                              Annotation changelog

                                                                                              Entry version: next

                                                                                              Date
                                                                                              Changes
                                                                                              Submitters
                                                                                              Reviewers
                                                                                              2024-03-20
                                                                                              MIBiG v4 annotathon
                                                                                              • (ID: 7LZK2REXWMB23Y766VYXAX3J)
                                                                                              • (ID: FGOE6VD55GZRETNYSNOKUJZO)
                                                                                              • (ID: CVBS4CX3MGQ2Y6Q45INSO263)
                                                                                              • (ID: 4CEPXXFDQQ46VQJXBT4B4AUO)
                                                                                              • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                                                                              Entry version: 3

                                                                                              Date
                                                                                              Changes
                                                                                              Submitters
                                                                                              Reviewers
                                                                                              2022-10-07
                                                                                              Update chemical activity to schema version 2.11
                                                                                              • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                                              • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                                                                              Entry version: 2

                                                                                              Date
                                                                                              Changes
                                                                                              Submitters
                                                                                              Reviewers
                                                                                              2022-09-15
                                                                                              Add precursor gene annotation
                                                                                              • (ID: 3UOU7PODQJXIM6BEPUHHRRA5)
                                                                                              • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                                              2022-09-15
                                                                                              Un-retire entry
                                                                                              • (ID: 3UOU7PODQJXIM6BEPUHHRRA5)
                                                                                              • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                                                                              Entry version: 1

                                                                                              Date
                                                                                              Changes
                                                                                              Submitters
                                                                                              Reviewers
                                                                                              2019-10-16
                                                                                              Submitted
                                                                                              • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                                              • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
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