BGC0001928: (2R,3S,4S)-5-fluoro-2,3,4-trihydroxypentanoic acid biosynthetic gene cluster from Streptomyces sp. MA37
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 1 - 8,550 nt. (total: 8,550 nt).
This entry is originally from NCBI GenBank LN612605.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
TTA codons
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
Biosynthesis
History
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0001928
Short description (2R,3S,4S)-5-fluoro-2,3,4-trihydroxypentanoic acid biosynthetic gene cluster from Streptomyces sp. MA37
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • other (other)
Loci
LN612605.1
via
Compounds
  • (2R,3S,4S)-5-fluoro-2,3,4-trihydroxypentanoic acid
Species Streptomyces sp. MA37 [taxonomy]
References
Chemical products information
(2R,3S,4S)-5-fluoro-2,3,4-trihydroxypentanoic acid Evidence: NMR [1]
Copy SMILES
C5H9F1O5
Chemical database entries
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • CEG06576.1
  • orf1
109 - 1362 (-) MFS family
    copy AA seq
    copy Nt seq
    • CEG06577.1
    • fdrE
    1551 - 2189 (+) LuxR family regulator
      copy AA seq
      copy Nt seq
      • CEG06578.1
      • fdrD
      2182 - 3039 (+) Cyclase
        copy AA seq
        copy Nt seq
        • CEG06579.1
        • fdrC
        3091 - 3876 (-) short chain dehydrogenase
          copy AA seq
          copy Nt seq
          • CEG06580.1
          • fdrB
          3873 - 5579 (-) dihydroxy-acid dehydratase
            copy AA seq
            copy Nt seq
            • CEG06581.1
            • fdrA
            5825 - 6625 (+) Phosphoesterase
              copy AA seq
              copy Nt seq
              • CEG06582.1
              • fdrF
              6643 - 7446 (+) Ribulose 5-phosphate 4 epimerase
                copy AA seq
                copy Nt seq
                • CEG06583.1
                • fdrG
                7476 - 8402 (-) ABC transporter
                  copy AA seq
                  copy Nt seq
                  Biosynthesis information
                  Annotation changelog

                  Entry version: next

                  Date
                  Changes
                  Submitters
                  Reviewers
                  MIBiG v4 annotathon
                  • (ID: LEEWIYEZSPCYOCCY6BHNTE54)
                  • (ID: PK3KAPGHQJXJCKMJ4SU7V5JW)
                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                  Entry version: 1

                  Date
                  Changes
                  Submitters
                  Reviewers
                  Submitted
                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                  Similar known gene clusters from MIBiG 4.0
                  Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
                  Click on reference genes to show details of similarities to genes within the current region.
                  Click on an accession to open that entry in the MiBIG database.