BGC0001937: tubercidin biosynthetic gene cluster from Streptomyces tubercidicus
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Location: 4,367 - 12,776 nt. (total: 8,410 nt).
This entry is originally from NCBI GenBank MG706975.1.

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core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
TTA codons
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Gene details
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General
Compounds
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KnownClusterBlast
General information about the BGC
MIBiG accession BGC0001937
Short description tubercidin biosynthetic gene cluster from Streptomyces tubercidicus
Status Minimal annotation: yes
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: Unknown
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • Other
Loci NCBI GenBank: MG706975.1
Compounds
  • tubercidin
Species Streptomyces tubercidicus [taxonomy]
References
Chemical products information
tubercidin [synonyms: Sparsomycin A, Tubercidine, sparsamycin A, Deazaadenosine]
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C11H14N4O4
Chemical database entries
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • AVW83008.1
  • orf-1
 4367 - 4543 (+) (2Fe-2S)-binding protein
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  • AVW83009.1
  • tubA
 4810 - 5187 (+) 6-Pyruvoyltetrahydropterin synthase
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  • AVW83010.1
  • tubB
 5587 - 6006 (+) Radical SAM family protein
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  • AVW83011.1
  • tubC
 6007 - 6606 (+) GTP cyclohydrolase I
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  • AVW83012.1
  • tubD
 6623 - 7780 (+) Guanosine monophosphate reductase
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  • AVW83013.1
  • tubE
 7777 - 8361 (+) Phosphoribosylpyrophospate transferase
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  • AVW83014.1
  • tubF
 8358 - 9626 (+) UbiD family decarboxylase
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  • AVW83015.1
  • tubG
 9667 - 10173 (+) Nudix hydrolase
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  • AVW83016.1
  • tubH
 10121 - 11065 (-) Carbohydrate kinase family protein
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  • AVW83017.1
  • tubI
 11255 - 12379 (+) MFS transporter
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  • AVW83018.1
  • orf1
 12570 - 12776 (-) hypothetical protein
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Annotation changelog
MIBiG version Submitter Notes
2.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Submitted
3.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Cleaned up synonym list
  • Fetch compound properties from PubChem
  • Updated bioactivity data
3.1
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Update chemical activity to schema version 2.11
Similar known gene clusters
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