BGC0001955: keratinimicin A biosynthetic gene cluster from Amycolatopsis keratiniphila
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 1 - 71,301 nt. (total: 71,301 nt).
This entry is originally from NCBI GenBank MH428036.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
TTA codons
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
NRP
History
NRPS/PKS domains
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0001955
Short description keratinimicin A biosynthetic gene cluster from Amycolatopsis keratiniphila
Status Minimal annotation: no
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: Unknown
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • NRP
Loci NCBI GenBank: MH428036.1
Compounds
  • keratinimicin A
  • keratinimicin B
  • keratinimicin C
  • keratinimicin D
Species Amycolatopsis keratiniphila [taxonomy]
References
Chemical products information
keratinimicin A
Copy SMILES
C84H92Cl2N8O33
Chemical database entries
PubCHEM
keratinimicin B
Copy SMILES
C78H83Cl2N9O26
Chemical database entries
PubCHEM
keratinimicin C [synonyms: Keratinimicin D]
Copy SMILES
C84H89Cl2N7O34
Chemical database entries
PubCHEM
keratinimicin D [synonyms: Keratinimicin C]
Copy SMILES
C84H90Cl2N8O32
Chemical database entries
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • AYA22303.1
328 - 864 (-) Ker4
copy AA seq
copy Nt seq
  • AYA22304.1
878 - 1324 (+) HxiR
copy AA seq
copy Nt seq
  • AYA22305.1
1399 - 2475 (-) DahP
copy AA seq
copy Nt seq
  • AYA22306.1
2647 - 3438 (-) DpgD
copy AA seq
copy Nt seq
  • AYA22307.1
3435 - 4649 (-) DpgC
copy AA seq
copy Nt seq
  • AYA22308.1
4646 - 5275 (-) DpgB
copy AA seq
copy Nt seq
  • AYA22309.1
5302 - 6420 (-) DpgA
copy AA seq
copy Nt seq
  • AYA22310.1
6556 - 7173 (-) KraD
copy AA seq
copy Nt seq
  • AYA22311.1
7197 - 8306 (-) KraC
copy AA seq
copy Nt seq
  • AYA22312.1
8303 - 9280 (-) KraB
copy AA seq
copy Nt seq
  • AYA22313.1
9282 - 10592 (-) KraA
copy AA seq
copy Nt seq
  • AYA22314.1
10906 - 12252 (-) Ker3
copy AA seq
copy Nt seq
  • AYA22315.1
12325 - 13401 (-) Hmo
copy AA seq
copy Nt seq
  • AYA22316.1
13398 - 14450 (-) HmaS
copy AA seq
copy Nt seq
  • AYA22317.1
14561 - 15751 (-) OxyD
copy AA seq
copy Nt seq
  • AYA22318.1
15766 - 17499 (-) KerE
copy AA seq
copy Nt seq
  • AYA22319.1
17496 - 18326 (-) Kph
copy AA seq
copy Nt seq
  • AYA22320.1
18502 - 19788 (+) HpgT
copy AA seq
copy Nt seq
  • AYA22321.1
20191 - 22062 (-) GtfD
copy AA seq
copy Nt seq
  • AYA22322.1
22133 - 22945 (-) Ker2
copy AA seq
copy Nt seq
  • AYA22323.1
23008 - 24183 (-) GtfC
copy AA seq
copy Nt seq
  • AYA22324.1
24274 - 25203 (-) KerM
copy AA seq
copy Nt seq
  • AYA22325.1
25255 - 26481 (-) GtfB
copy AA seq
copy Nt seq
  • AYA22326.1
26515 - 27702 (-) GtfA
copy AA seq
copy Nt seq
  • AYA22327.1
27755 - 29209 (-) KhaI
copy AA seq
copy Nt seq
  • AYA22328.1
29292 - 30512 (-) OxyC
copy AA seq
copy Nt seq
  • AYA22329.1
30630 - 31826 (-) OxyB
copy AA seq
copy Nt seq
  • AYA22330.1
32250 - 32435 (-) Ker1
copy AA seq
copy Nt seq
  • AYA22331.1
32463 - 33668 (-) OxyA
copy AA seq
copy Nt seq
  • AYA22332.1
33749 - 33958 (-) MbtH
copy AA seq
copy Nt seq
  • AYA22333.1
33955 - 39549 (-) KerD
copy AA seq
copy Nt seq
  • AYA22334.1
39698 - 51877 (-) KerC
copy AA seq
copy Nt seq
  • AYA22335.1
52184 - 55351 (-) KerB
copy AA seq
copy Nt seq
  • AYA22336.1
55348 - 61596 (-) KerA
copy AA seq
copy Nt seq
  • AYA22337.1
61593 - 63500 (-) Tri
copy AA seq
copy Nt seq
  • AYA22338.1
63664 - 64575 (-) Pdh
copy AA seq
copy Nt seq
  • AYA22339.1
64624 - 65310 (-) AjrR
copy AA seq
copy Nt seq
  • AYA22340.1
66863 - 67471 (-) VanX
copy AA seq
copy Nt seq
  • AYA22341.1
67461 - 68507 (-) VanA
copy AA seq
copy Nt seq
  • AYA22342.1
68509 - 69372 (-) VanH
copy AA seq
copy Nt seq
  • AYA22343.1
69662 - 70336 (-) Orf1
copy AA seq
copy Nt seq
  • AYA22344.1
70456 - 71115 (+) Orf2
copy AA seq
copy Nt seq
NRP-specific information
Subclass N/A
Cyclic? no
NRP-synthases
Gene Modules
AYA22318.1
Module ?
Specificity: tyrosine
Evidence for specificity:
  • Homology
AYA22333.1
Module ?
Specificity: 3,5-dihydroxyphenylglycine
Evidence for specificity:
  • Structure-based inference
AYA22334.1
Module ?
Specificity: 4-hydroxyphenylglycine
Evidence for specificity:
  • Structure-based inference
Module ?
Specificity: 4-hydroxyphenylglycine
Evidence for specificity:
  • Structure-based inference
Module ?
Specificity: R-beta-hydroxytyrosine
Evidence for specificity:
  • Structure-based inference
AYA22335.1
Module ?
Specificity: phenylalanine
Evidence for specificity:
  • Structure-based inference
AYA22336.1
Module ?
Specificity: 4-hydroxyphenylglycine
Evidence for specificity:
  • Structure-based inference
Module ?
Specificity: R-beta-hydroxytyrosine
Evidence for specificity:
  • Structure-based inference
Annotation changelog
MIBiG version Submitter Notes
2.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Submitted
3.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Hidden contributor (ID: D5JND5QKNDZL5GA5REF5XZTD, no GDPR consent given).
  • Cleaned up synonym list
  • Fetch compound properties from PubChem
  • Corrected biosynthetic class
  • Added NRP substrate specificities
Detailed domain annotation
Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
A glossary is available here.
Selected features only
Show module domains
Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.