BGC0001999: gramibactin biosynthetic gene cluster from Paraburkholderia graminis C4D1M
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Location: 101,206 - 144,574 nt. (total: 43,369 nt).
This entry is originally from NCBI GenBank NZ_ABLD01000016.1.

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core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
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Gene details
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General
Compounds
Genes
NRP
History
NRPS/PKS domains
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0001999
Short description gramibactin biosynthetic gene cluster from Paraburkholderia graminis C4D1M
Status Minimal annotation: no
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: Unknown
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • NRP
Loci NCBI GenBank: NZ_ABLD01000016.1
Compounds
  • gramibactin
Species Paraburkholderia graminis C4D1M [taxonomy]
References
Chemical products information
gramibactin
(no structure information available)
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • BGRAMDRAFT_RS22615
  • WP_006051162.1
 101206 - 102477 (-) MFS transporter
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  • BGRAMDRAFT_RS22620
  • WP_157140642.1
 102804 - 104906 (+) TonB-dependent siderophore receptor
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  • BGRAMDRAFT_RS22625
  • WP_006051164.1
  • fhuB
 104973 - 106964 (-) Fe(3+)-hydroxamate ABC transporter permease FhuB
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  • BGRAMDRAFT_RS22630
  • WP_006051165.1
 106961 - 107929 (-) ABC transporter substrate-binding protein
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  • BGRAMDRAFT_RS22635
  • WP_232292336.1
 107976 - 110120 (-) TonB-dependent siderophore receptor
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  • BGRAMDRAFT_RS22640
 110375 - 116390 (-) amino acid adenylation domain-containing protein
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  • BGRAMDRAFT_RS22645
  • WP_006051170.1
 116721 - 133445 (-) non-ribosomal peptide synthetase
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  • BGRAMDRAFT_RS22650
  • WP_006051172.1
 133549 - 137142 (-) condensation domain-containing protein
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  • BGRAMDRAFT_RS22655
  • WP_232292338.1
 137379 - 138146 (-) ATP-binding cassette domain-containing protein
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  • BGRAMDRAFT_RS22660
  • WP_006051174.1
 138220 - 139866 (-) cyclic peptide export ABC transporter
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  • BGRAMDRAFT_RS22665
  • WP_006051175.1
 139906 - 140790 (-) YqcI/YcgG family protein
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  • BGRAMDRAFT_RS22670
  • WP_006051176.1
 140958 - 142394 (-) hypothetical protein
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  • BGRAMDRAFT_RS22675
  • WP_006051177.1
 142465 - 143343 (-) alpha/beta fold hydrolase
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  • BGRAMDRAFT_RS22680
  • WP_006051178.1
 143362 - 143595 (-) MbtH family NRPS accessory protein
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  • BGRAMDRAFT_RS22685
  • WP_006051179.1
 143951 - 144574 (+) nitroreductase
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NRP-specific information
Subclass N/A
Cyclic? no
NRP-synthases
Gene Modules
BGRAMDRAFT_RS22640
Module ?
Specificity: graminine
Evidence for specificity:
  • Structure-based inference
BGRAMDRAFT_RS22645
Module ?
Specificity: aspartic acid
Evidence for specificity:
  • Structure-based inference
  • Sequence-based prediction
Module ?
Specificity: threonine
Evidence for specificity:
  • Structure-based inference
  • Sequence-based prediction
Module ?
Specificity: threonine
Evidence for specificity:
  • Structure-based inference
  • Sequence-based prediction
Module ?
Specificity: graminine
Evidence for specificity:
  • Structure-based inference
Module ?
Specificity: glycine
Evidence for specificity:
  • Structure-based inference
  • Sequence-based prediction
Annotation changelog
MIBiG version Submitter Notes
2.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Submitted
3.0
  • Hidden contributor (ID: CUSGWVK3I4TVHJH7NHPFAP2L, no GDPR consent given).
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Fixed DOIs
  • Added NRP substrate specificities
Detailed domain annotation
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