BGC0002008 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

BGC0002008 (Xenorhabdus doucetiae)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1	arylpolyene	1	15,251	aryl polyenes	other:other	100%

BGC0002008 - Region 1 - arylpolyene

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Location: 1 - 15,251 nt. (total: 15,251 nt) Show pHMM detection rules used

Region on contig edge.

arylpolyene: (APE_KS1 or APE_KS2)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

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Gene details

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Gene overview

MIBiG

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

External annotation

Name		MIBiG
Version		4.0alpha

Type		Subregion
Location		1 - 15,252
Label		BGC0002008

Detailed domain annotation

Selected features only

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Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002008	1.00	Other	aryl polyenes	Xenorhabdus doucetiae
BGC0000836	0.53	Other	APE Ec	Escherichia coli CFT073
BGC0000837	0.30	Other	APE Vf	Aliivibrio fischeri ES114
BGC0002510	0.24	Polyketide	youssoufene A1, youssoufene B1, youssoufene B2, youssoufene B3, youssoufene B4	Streptomyces sp.
BGC0000840	0.24	Other	xanthomonadin I	Xanthomonas oryzae pv. oryzae
BGC0002711	0.23	Polyketide	nostovalerolactone, 9-dehydronostovalerolactone	Nostoc punctiforme PCC 73102
BGC0000196	0.22	Polyketide	AQ-256, AQ-270a, AQ-284a	Photorhabdus laumondii subsp. laumondii TTO1
BGC0000272	0.22	Polyketide	spore pigment	Streptomyces collinus
BGC0002218	0.20	Terpene	(-)-Cyatha-3,12-diene	Dentipellis sp. KUC8613
BGC0001651	0.20	Other	legionaminic acid	Tannerella forsythia 92A2

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002008	1.00	Other	aryl polyenes	Xenorhabdus doucetiae
BGC0000836	0.80	Other	APE Ec	Escherichia coli CFT073
BGC0000837	0.64	Other	APE Vf	Aliivibrio fischeri ES114
BGC0002510	0.58	Polyketide	youssoufene A1, youssoufene B1, youssoufene B2, youssoufene B3, youssoufene B4	Streptomyces sp.
BGC0000840	0.58	Other	xanthomonadin I	Xanthomonas oryzae pv. oryzae
BGC0002711	0.56	Polyketide	nostovalerolactone, 9-dehydronostovalerolactone	Nostoc punctiforme PCC 73102
BGC0000196	0.55	Polyketide	AQ-256, AQ-270a, AQ-284a	Photorhabdus laumondii subsp. laumondii TTO1
BGC0000272	0.55	Polyketide	spore pigment	Streptomyces collinus
BGC0002218	0.52	Terpene	(-)-Cyatha-3,12-diene	Dentipellis sp. KUC8613
BGC0001651	0.52	Other	legionaminic acid	Tannerella forsythia 92A2

Similar known gene clusters from MIBiG 4.0

NRPS/PKS substrates

NRPS/PKS substrate predictions

XDD1_RS16015

AMP-binding (36..293): X

nrpys: Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: --FIVAIIMK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)