BGC0002008: aryl polyenes biosynthetic gene cluster from Xenorhabdus doucetiae
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
View antiSMASH-generated output
Download Cluster GenBank file
Download region SVG
Location: 3,655,966 - 3,671,216 nt. (total: 15,251 nt).
This entry is originally from NCBI GenBank NZ_FO704550.1, but has been modified (see Modifications tab for details).

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
History
KnownClusterBlast
Modifications
General information about the BGC
MIBiG accession BGC0002008
Short description aryl polyenes biosynthetic gene cluster from Xenorhabdus doucetiae
Status Minimal annotation: no
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: Unknown
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • Other
Loci NCBI GenBank: NZ_FO704550.1
Compounds
  • aryl polyenes
Species Xenorhabdus doucetiae [taxonomy]
References
Chemical products information
aryl polyenes
(no structure information available)
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • XDD1_RS15980
  • WP_045972701.1
 3655966 - 3656355 (+) hypothetical protein
copy AA seq
copy Nt seq
  • XDD1_RS15985
  • WP_045972703.1
 3656468 - 3657541 (+) SAM-dependent methyltransferase
copy AA seq
copy Nt seq
  • XDD1_RS15990
  • WP_045972706.1
 3657555 - 3658274 (+) beta-ketoacyl synthase chain length factor
copy AA seq
copy Nt seq
  • XDD1_RS15995
  • WP_045972707.1
 3658276 - 3659067 (+) 1-acyl-sn-glycerol-3-phosphate acyltransferase
copy AA seq
copy Nt seq
  • XDD1_RS16000
  • WP_045972709.1
 3659086 - 3659343 (+) phosphopantetheine-binding protein
copy AA seq
copy Nt seq
  • XDD1_RS16005
  • WP_045972712.1
 3659355 - 3659606 (+) acyl carrier protein
copy AA seq
copy Nt seq
  • XDD1_RS16010
  • WP_045972714.1
 3659656 - 3660219 (+) hypothetical protein
copy AA seq
copy Nt seq
  • XDD1_RS16015
  • WP_052705732.1
 3660216 - 3661601 (+) AMP-binding protein
copy AA seq
copy Nt seq
  • XDD1_RS16020
  • WP_045972718.1
 3661588 - 3661947 (+) hydroxymyristoyl-ACP dehydratase
copy AA seq
copy Nt seq
  • XDD1_RS16025
  • WP_045972720.1
 3661938 - 3663653 (+) glycosyltransferase family 2 protein
copy AA seq
copy Nt seq
  • XDD1_RS16030
  • WP_045972722.1
 3663658 - 3664080 (+) acyl-CoA thioesterase
copy AA seq
copy Nt seq
  • XDD1_RS16035
  • WP_045973732.1
 3664098 - 3664700 (+) outer membrane lipoprotein carrier protein LolA
copy AA seq
copy Nt seq
  • XDD1_RS16040
  • WP_045972724.1
 3664672 - 3666996 (+) MMPL family transporter
copy AA seq
copy Nt seq
  • XDD1_RS16045
  • WP_045972727.1
 3666993 - 3667556 (+) DUF3261 domain-containing protein
copy AA seq
copy Nt seq
  • XDD1_RS16050
  • WP_045972729.1
 3667560 - 3668735 (+) beta-ketoacyl-[acyl-carrier-protein] synthase family protein
copy AA seq
copy Nt seq
  • XDD1_RS16055
  • WP_148886113.1
 3668735 - 3669232 (+) hotdog family protein
copy AA seq
copy Nt seq
  • XDD1_RS16060
  • WP_045972731.1
 3669229 - 3669960 (+) 3-ketoacyl-ACP reductase FabG2
copy AA seq
copy Nt seq
  • XDD1_RS16065
  • WP_045972733.1
 3669957 - 3671216 (+) beta-ketoacyl-ACP synthase
copy AA seq
copy Nt seq
Annotation changelog
MIBiG version Submitter Notes
2.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Submitted
3.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Added AMP-binding domain substrate specificities
Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
Modifications to original record
  • XDD1_RS00070 crossed the origin and was split into two features