BGC0002025: thaxteramide C biosynthetic gene cluster from Jahnella sp. MSr9139
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 1 - 78,740 nt. (total: 78,740 nt).
This entry is originally from NCBI GenBank MK551161.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
TTA codons
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
Biosynthesis
History
NRPS/PKS domains
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0002025
Short description thaxteramide C biosynthetic gene cluster from Jahnella sp. MSr9139
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • NRPS (Type I)
  • PKS (Unknown)
Loci
MK551161.1
via
Compounds
  • thaxteramide C
Species Jahnella sp. MSr9139 [taxonomy]
References
Chemical products information
thaxteramide C Evidence:
(no structure information available)
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • QDA77028.1
148 - 2136 (-) hypothetical protein
    copy AA seq
    copy Nt seq
    • QDA77029.1
    2140 - 2943 (-) membrane protein TerC family
      copy AA seq
      copy Nt seq
      • QDA77030.1
      3188 - 4642 (+) acylating methylmalonate-semialdehyde dehydrogenase
        copy AA seq
        copy Nt seq
        • QDA77031.1
        4642 - 5514 (+) beta-ureidopropionase
          copy AA seq
          copy Nt seq
          • QDA77032.1
          5582 - 6985 (+) dihydropyrimidinase
            copy AA seq
            copy Nt seq
            • QDA77033.1
            7021 - 8403 (+) dihydropyrimidine dehydrogenase subunit
              copy AA seq
              copy Nt seq
              • QDA77034.1
              8407 - 9801 (+) dihydropyrimidine dehydrogenase subunit
                copy AA seq
                copy Nt seq
                • QDA77035.1
                9832 - 11298 (+) allantoin transporter
                  copy AA seq
                  copy Nt seq
                  • QDA77036.1
                  11325 - 11717 (-) hypothetical protein
                    copy AA seq
                    copy Nt seq
                    • QDA77037.1
                    11714 - 12016 (-) hypothetical protein
                      copy AA seq
                      copy Nt seq
                      • QDA77038.1
                      12009 - 12590 (-) ECF subfamily RNA polymerase sigma-24 subunit
                        copy AA seq
                        copy Nt seq
                        • QDA77039.1
                        12790 - 13584 (+) short-chain dehydrogenase/reductase SDR
                          copy AA seq
                          copy Nt seq
                          • QDA77040.1
                          13589 - 15760 (-) PAS/PAC sensor signal transduction histidine kinase
                            copy AA seq
                            copy Nt seq
                            • QDA77041.1
                            15846 - 17273 (-) hypothetical protein
                              copy AA seq
                              copy Nt seq
                              • QDA77042.1
                              17469 - 18998 (+) sigma-54 dependent transcriptional regulator
                                copy AA seq
                                copy Nt seq
                                • QDA77043.1
                                19010 - 19729 (+) hypothetical protein
                                  copy AA seq
                                  copy Nt seq
                                  • QDA77044.1
                                  • thxC1
                                  20378 - 39373 (+) polyketide synthase
                                    copy AA seq
                                    copy Nt seq
                                    • QDA77045.1
                                    • thxC2
                                    39363 - 61112 (+) polyketide synthase/nonribosomal peptide synthetase
                                      copy AA seq
                                      copy Nt seq
                                      • QDA77046.1
                                      61771 - 66924 (+) protein kinase
                                        copy AA seq
                                        copy Nt seq
                                        • QDA77047.1
                                        66965 - 68251 (-) major facilitator superfamily protein
                                          copy AA seq
                                          copy Nt seq
                                          • QDA77048.1
                                          68416 - 69966 (+) hypothetical protein
                                            copy AA seq
                                            copy Nt seq
                                            • QDA77049.1
                                            69994 - 71097 (-) membrane protease subunit stomatin/prohibitin-like protein
                                              copy AA seq
                                              copy Nt seq
                                              • QDA77050.1
                                              71429 - 72109 (-) hypothetical protein
                                                copy AA seq
                                                copy Nt seq
                                                • QDA77051.1
                                                72165 - 73895 (-) ABC-type siderophore export system
                                                  copy AA seq
                                                  copy Nt seq
                                                  • QDA77052.1
                                                  74015 - 75349 (-) hypothetical protein
                                                    copy AA seq
                                                    copy Nt seq
                                                    • QDA77053.1
                                                    75613 - 78549 (-) protein kinase
                                                      copy AA seq
                                                      copy Nt seq
                                                      Biosynthesis information

                                                      Biosynthetic modules

                                                      Name
                                                      Unk01
                                                      Type
                                                      nrps-type1
                                                      Genes
                                                      thxC2
                                                      Substrates
                                                      asparagine (evidence: Structure-based inference, Sequence-based prediction)
                                                      Integrated Monomers
                                                      Domains
                                                      adenylation
                                                      Name
                                                      Unk02
                                                      Type
                                                      nrps-type1
                                                      Genes
                                                      thxC2
                                                      Substrates
                                                      tyrosine (evidence: Structure-based inference, Sequence-based prediction)
                                                      Integrated Monomers
                                                      Domains
                                                      adenylation
                                                      Name
                                                      Unk03
                                                      Type
                                                      nrps-type1
                                                      Genes
                                                      thxC2
                                                      Substrates
                                                      glycine (evidence: Structure-based inference, Sequence-based prediction)
                                                      Integrated Monomers
                                                      Domains
                                                      adenylation
                                                      Name
                                                      Unk04
                                                      Type
                                                      nrps-type1
                                                      Genes
                                                      thxC2
                                                      Substrates
                                                      beta-alanine (evidence: Structure-based inference [1])
                                                      Integrated Monomers
                                                      Domains
                                                      adenylation
                                                      Name
                                                      Unk05
                                                      Type
                                                      nrps-type1
                                                      Genes
                                                      thxC2
                                                      Substrates
                                                      tyrosine (evidence: Structure-based inference, Sequence-based prediction)
                                                      Integrated Monomers
                                                      Domains
                                                      adenylation
                                                      Annotation changelog

                                                      Entry version: 3

                                                      Date
                                                      Changes
                                                      Submitters
                                                      Reviewers
                                                      Update chemical activity to schema version 2.11
                                                      • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                      • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                                      Entry version: 2

                                                      Date
                                                      Changes
                                                      Submitters
                                                      Reviewers
                                                      Added missing polyketide class
                                                      • (ID: CUSGWVK3I4TVHJH7NHPFAP2L)
                                                      • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                      Updated bioactivity data
                                                      • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                      • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                      Added NRP substrate specificities
                                                      • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                      • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                                      Entry version: 1

                                                      Date
                                                      Changes
                                                      Submitters
                                                      Reviewers
                                                      Submitted
                                                      • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                      • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                      Detailed domain annotation
                                                      Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
                                                      A domain glossary is available here, and an explanation of the visualisation is available here.
                                                      Selected features only
                                                      Show module domains
                                                      Similar known gene clusters from MIBiG 4.0
                                                      Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
                                                      Click on reference genes to show details of similarities to genes within the current region.
                                                      Click on an accession to open that entry in the MiBIG database.