BGC0002039: coformycin biosynthetic gene cluster from Nocardia interforma ATCC 21072
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Location: 1 - 30,309 nt. (total: 30,309 nt).
This entry is originally from NCBI GenBank KY682079.1.

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core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
TTA codons
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Gene details
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General
Compounds
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KnownClusterBlast
General information about the BGC
MIBiG accession BGC0002039
Short description coformycin biosynthetic gene cluster from Nocardia interforma ATCC 21072
Status Minimal annotation: yes
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: Unknown
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • Other
Loci NCBI GenBank: KY682079.1
Compounds
  • coformycin
  • formycin A
Species Nocardia interforma ATCC 21072 [taxonomy]
References
Chemical products information
coformycin
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Chemical database entries
PubCHEM
NPAtlas
formycin A
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Chemical database entries
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • AVW82896.1
  • orf-1
 1 - 438 (-) hypothetical protein
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  • AVW82897.1
  • focS
 473 - 2059 (-) fumarate reductase/succinate dehydrogenase
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  • AVW82898.1
  • focE
 2574 - 3512 (+) putative monooxygenase
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  • AVW82899.1
  • focD
 3502 - 4836 (+) putative monooxygenase
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  • AVW82900.1
  • focG
 4913 - 5752 (+) transcriptional regulator
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  • AVW82901.1
  • focR
 5797 - 6852 (-) glycine/D-amino acid oxidase
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  • AVW82902.1
  • focM
 7018 - 8259 (+) phosphoribosylglycinamide synthetase
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  • AVW82903.1
  • focL
 8340 - 9521 (+) saccharopine dehydrogenase
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  • AVW82904.1
  • focK
 9521 - 10831 (+) L-lysine N6-monooxygenase
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  • AVW82905.1
  • focJ
 10857 - 12863 (+) methionine-tRNA ligase
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  • AVW82906.1
  • focI
 12860 - 14161 (+) aminotransferase
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  • AVW82907.1
  • foc1
 14192 - 14920 (+) SAICAR synthetase
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  • AVW82908.1
  • foc2
 14910 - 15605 (+) short chain dehydrognase
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  • AVW82909.1
  • foc3
 15605 - 16378 (+) hydrolase
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  • AVW82910.1
  • foc4
 16380 - 17252 (+) ATP phosphoribosyltransferase
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  • AVW82911.1
  • focF
 17282 - 18286 (-) phosphoglycerate dehydrogenase
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  • AVW82912.1
  • focU
 18424 - 19647 (+) phthalate 4,5-dioxygenase
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  • AVW82913.1
  • focA
 19679 - 20959 (+) adenylosuccinate synthetase
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  • AVW82914.1
  • focH
 20959 - 21522 (+) AICAR transformylase
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  • AVW82915.1
  • focQ
 21566 - 22729 (-) amidohydrolase
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  • AVW82916.1
  • focN
 22801 - 23502 (+) putative HAD superfamily hydrolase
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  • AVW82917.1
  • foc5
 23555 - 24739 (-) MFS transporter
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  • AVW82918.1
  • focB
 24768 - 26210 (-) adenylosuccinate lyase
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  • AVW82919.1
  • focT
 26207 - 27232 (-) Beta-ribofuranosylaminobenzene 5'-phosphate synthase
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  • AVW82920.1
  • focC
 27246 - 28130 (-) SAICAR synthetase
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  • AVW82921.1
  • focX
 28386 - 29252 (+) 6-phosphofructokinase
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  • AVW82922.1
  • focP
 29216 - 29833 (+) NUDIX hydrolase
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  • AVW82923.1
  • Orf_1
 29839 - 30309 (-) flavin reductase
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Annotation changelog
MIBiG version Submitter Notes
3.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Entry added
3.1
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Changed chemical structures for compounds: coformycin.
  • Added NPAtlas links to compounds: coformycin.
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