BGC0002071: virginiafactin A biosynthetic gene cluster from Pseudomonas sp. QS1027
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Location: 289,715 - 316,980 nt. (total: 27,266 nt).
This entry is originally from NCBI GenBank NZ_PHSU01000004.1.

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core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
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Gene details
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General
Compounds
Genes
NRP
History
NRPS/PKS domains
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0002071
Short description virginiafactin A biosynthetic gene cluster from Pseudomonas sp. QS1027
Status Minimal annotation: no
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: complete
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • NRP (Other lipopeptide)
Loci NCBI GenBank: NZ_PHSU01000004.1
Compounds
  • virginiafactin A
  • virginiafactin B
  • virginiafactin C
  • virginiafactin D
Species Pseudomonas sp. QS1027 [taxonomy]
References
Chemical products information
virginiafactin A
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C53H97N9O13
Chemical database entries
NPAtlas
virginiafactin B
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Chemical database entries
NPAtlas
virginiafactin C
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Chemical database entries
NPAtlas
virginiafactin D
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Chemical database entries
NPAtlas
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • CWE01_RS05095
  • WP_100939442.1
 289715 - 299209 (+) non-ribosomal peptide synthetase
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  • CWE01_RS05100
  • WP_100939443.1
 299206 - 316980 (+) non-ribosomal peptide synthetase
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NRP-specific information
Subclass Other lipopeptide
Cyclic? no
Release type
  • Hydrolysis
Lipid moiety (R)-3-hydroxydecanoic acid
NRP-synthases
Gene Modules
CWE01_RS05095
Module 1
Specificity: leucine
Evidence for specificity:
  • Structure-based inference
Condensation domain type: Starter
Module 2
Specificity: leucine
Evidence for specificity:
  • Structure-based inference
Condensation domain type: Dual
Module 3
Specificity: glutamine
Evidence for specificity:
  • Structure-based inference
Condensation domain type: Dual
CWE01_RS05100
Module 4
Specificity: leucine
Evidence for specificity:
  • Structure-based inference
Condensation domain type: Dual
Module 5
Specificity: serine
Evidence for specificity:
  • Structure-based inference
Condensation domain type: LCL
Module 6
Specificity: isoleucine / valine
Evidence for specificity:
  • Structure-based inference
Condensation domain type: Dual
Module 7
Specificity: leucine
Evidence for specificity:
  • Structure-based inference
Condensation domain type: LCL
Module 8
Specificity: leucine
Evidence for specificity:
  • Structure-based inference
Condensation domain type: Dual
Annotation changelog
MIBiG version Submitter Notes
3.0
  • Hidden contributor (ID: O3ZSI4V6BQREG2DOQHOQ27FT, no GDPR consent given).
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Submitted
  • Corrected NRP module activity
  • Added version to NCBI accession
  • Updated NRP substrate specificities
Detailed domain annotation
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