BGC0002075 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

BGC0002075 (Pseudomonas fluorescens)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1	NRPS	1	3,894	pyreudione A/pyreudione B/pyreudione C/pyreudione D/pyreudione E	NRPS:Type I	100%

BGC0002075 - Region 1 - NRPS

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Location: 1 - 3,894 nt. (total: 3,894 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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Gene details

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Gene overview

MIBiG

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

External annotation

Name		MIBiG
Version		4.0alpha

Type		Subregion
Location		1 - 3,895
Label		BGC0002075

Detailed domain annotation

Selected features only

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Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002075	1.00	NRP, Alkaloid	pyreudione A, pyreudione B, pyreudione C, pyreudione D, pyreudione E	Pseudomonas fluorescens
BGC0001833	0.24	NRP	icosalide A, icosalide B	Burkholderia gladioli
BGC0001132	0.23	NRP	xenotetrapeptide	Xenorhabdus nematophila ATCC 19061
BGC0001825	0.23	NRP	xenematide	Xenorhabdus nematophila AN6/1
BGC0001128	0.23	NRP	gamexpeptide C	Photorhabdus laumondii subsp. laumondii TTO1
BGC0002286	0.23	NRP	ririwpeptide A, ririwpeptide B, ririwpeptide C	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001758	0.23	NRP	rhizomide A, rhizomide B, rhizomide C	Paraburkholderia rhizoxinica HKI 454
BGC0001641	0.21	NRP	kolossin	Photorhabdus laumondii subsp. laumondii TTO1
BGC0002135	0.21	NRP	bovienimide A	Xenorhabdus bovienii SS-2004
BGC0002518	0.21	NRP	syringafactin A, syringafactin C	Pseudomonas sp. SZ57

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002075	1.00	NRP, Alkaloid	pyreudione A, pyreudione B, pyreudione C, pyreudione D, pyreudione E	Pseudomonas fluorescens
BGC0001833	0.57	NRP	icosalide A, icosalide B	Burkholderia gladioli
BGC0001132	0.57	NRP	xenotetrapeptide	Xenorhabdus nematophila ATCC 19061
BGC0001825	0.56	NRP	xenematide	Xenorhabdus nematophila AN6/1
BGC0001128	0.56	NRP	gamexpeptide C	Photorhabdus laumondii subsp. laumondii TTO1
BGC0002286	0.56	NRP	ririwpeptide A, ririwpeptide B, ririwpeptide C	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001758	0.56	NRP	rhizomide A, rhizomide B, rhizomide C	Paraburkholderia rhizoxinica HKI 454
BGC0001641	0.54	NRP	kolossin	Photorhabdus laumondii subsp. laumondii TTO1
BGC0002135	0.54	NRP	bovienimide A	Xenorhabdus bovienii SS-2004
BGC0002518	0.54	NRP	syringafactin A, syringafactin C	Pseudomonas sp. SZ57

Similar known gene clusters from MIBiG 4.0

Module view

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NRPS/PKS products

NRPS/PKS substrates

Predicted core structure(s)

For candidate cluster 1, location 0 - 3894:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (Pro)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS substrate predictions

A8O26_RS14270

Search NORINE for peptide: strict or relaxed

AMP-binding (463..849): Pro

nrpys: Pro

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DMLVMGVFAK
Nearest Stachelhaus code(s):: Pro DMLVMGVFAK (100% 8Å match)
Stachelhaus code match:: 100% (strong)