BGC0002106: rimocidin biosynthetic gene cluster from Streptomyces rimosus subsp. rimosus NRRL WC-3558
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Location: 102,018 - 198,711 nt. (total: 96,694 nt).
This entry is originally from NCBI GenBank NZ_JOBS01000013.1.

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core biosynthetic genes
additional biosynthetic genes
transport-related genes
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Gene details
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General
Compounds
Genes
Biosynthesis
History
NRPS/PKS domains
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0002106
Short description rimocidin biosynthetic gene cluster from Streptomyces rimosus subsp. rimosus NRRL WC-3558
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: partial
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • PKS (Modular type I)
Loci
NZ_JOBS01000013.1
102018 - 198711
via Gene expression correlated with compound production
Compounds
  • rimocidin
Species Streptomyces rimosus subsp. rimosus NRRL WC-3558 [taxonomy]
References
Chemical products information
rimocidin Evidence: NMR, Mass spectrometry
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Chemical database entries
PubCHEM
NPAtlas
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • IH19_RS0119070
  • WP_003982106.1
 102018 - 103541 (+) chitinase
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    • IH19_RS1000000150140
    		 103671 - 103775 (+) XRE family transcriptional regulator
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      • IH19_RS1000000145160
      • WP_003982108.1
      		 103790 - 105517 (-) sigma-70 family RNA polymerase sigma factor
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        • IH19_RS1000000148750
        • WP_003982109.1
        		 105514 - 105789 (-) hypothetical protein
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          • IH19_RS0119085
          • WP_003982110.1
          		 106651 - 107682 (+) GDP-mannose 4,6-dehydratase
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            • IH19_RS0119090
            • WP_003982111.1
            		 107812 - 108579 (+) alpha/beta fold hydrolase
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              • IH19_RS0119095
              • WP_003982112.1
              		 108712 - 111615 (+) LuxR family transcriptional regulator
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                • IH19_RS0119100
                • WP_226048589.1
                		 111635 - 114442 (+) LuxR family transcriptional regulator
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                  • IH19_RS1000000150860
                  • WP_003982114.1
                  		 114456 - 117188 (+) AAA family ATPase
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                    • IH19_RS0119110
                    • WP_030180237.1
                    		 117626 - 118258 (+) LuxR C-terminal-related transcriptional regulator
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                      • IH19_RS0119115
                      • WP_030180235.1
                      		 118628 - 147049 (+) type I polyketide synthase
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                        • IH19_RS01000000143620
                        		 147060 - 153333 (+) type I polyketide synthase
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                          • IH19_RS1000000149540
                          		 153369 - >164487 (+) SDR family NAD(P)-dependent oxidoreductase
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                            • IH19_RS1000000150160
                            • WP_231512715.1
                            		 164644 - 165426 (+) alpha/beta fold hydrolase
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                              • IH19_RS0119135
                              • WP_032929422.1
                              		 165600 - 185831 (+) type I polyketide synthase
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                                • IH19_RS0119140
                                • WP_043976681.1
                                		 185940 - 187064 (-) tyrosine-protein phosphatase
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                                  • IH19_RS0119145
                                  • WP_078575849.1
                                  		 187381 - 188955 (+) GMC oxidoreductase
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                                    • IH19_RS0119150
                                    • WP_003985476.1
                                    		 189185 - 190567 (+) glycosyltransferase
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                                      • IH19_RS0119155
                                      • WP_003985475.1
                                      		 190621 - 191679 (+) DegT/DnrJ/EryC1/StrS family aminotransferase
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                                        • IH19_RS0119160
                                        • WP_003985474.1
                                        		 191708 - 192970 (+) cytochrome P450
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                                          • IH19_RS0119165
                                          • WP_003985473.1
                                          		 193056 - 193247 (+) ferredoxin
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                                            • IH19_RS0119170
                                            • WP_226048588.1
                                            		 193355 - 198541 (+) beta-ketoacyl synthase N-terminal-like domain-containing protein
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                                              Biosynthesis information
                                              Annotation changelog

                                              Entry version: 2

                                              Date
                                              Changes
                                              Submitters
                                              Reviewers
                                              2022-10-07
                                              Update chemical activity to schema version 2.11
                                              • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                              • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                              2022-10-07
                                              Added NPAtlas links to compounds: rimocidin.
                                              • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                              • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                              Entry version: 1

                                              Date
                                              Changes
                                              Submitters
                                              Reviewers
                                              2022-09-15
                                              Submitted
                                              • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                              • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                              Detailed domain annotation
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