BGC0002114: sandarazol A biosynthetic gene cluster from Sandaracinus sp. MSr10575
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 43,000 - 89,000 nt. (total: 46,001 nt).
This entry is originally from NCBI GenBank MW053453.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
TTA codons
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
Biosynthesis
History
NRPS/PKS domains
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0002114
Short description sandarazol A biosynthetic gene cluster from Sandaracinus sp. MSr10575
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: complete
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • NRPS (Type I)
  • PKS (Trans-AT type I)
Loci
MW053453.1
43000 - 89000
via Heterologous expression
Compounds
  • sandarazol A
  • sandarazol C
  • sandarazol E
  • sandarazol G
  • sandarazol B
  • sandarazol D
  • sandarazol F
  • Sandarazol A
  • Sandarazol B
  • Sandarazol E
  • Sandarazol F
  • Sandarazol G
  • Sandarazol C
  • Sandarazol D
Species Sandaracinus sp. MSr10575 [taxonomy]
References
Chemical products information
sandarazol A Evidence: NMR [1]
Copy SMILES
C30H46N4O7
Chemical database entries
NPAtlas
sandarazol C Evidence: NMR [1]
Copy SMILES
Chemical database entries
NPAtlas
sandarazol E Evidence: NMR [1]
Copy SMILES
Chemical database entries
NPAtlas
sandarazol G Evidence: NMR [1]
Copy SMILES
Chemical database entries
NPAtlas
sandarazol B Evidence: NMR [1]
Copy SMILES
Chemical database entries
NPAtlas
sandarazol D Evidence: NMR [1]
Copy SMILES
Chemical database entries
NPAtlas
sandarazol F Evidence: NMR [1]
Copy SMILES
Chemical database entries
NPAtlas
Sandarazol A Evidence: NMR [1]
(no structure information available)
Sandarazol B Evidence: NMR [1]
(no structure information available)
Sandarazol E Evidence: NMR [1]
(no structure information available)
Sandarazol F Evidence: NMR [1]
(no structure information available)
Sandarazol G Evidence: NMR [1]
(no structure information available)
Sandarazol C Evidence: NMR [1]
(no structure information available)
Sandarazol D Evidence: NMR [1]
(no structure information available)
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • MSR10575_88360
  • QRN75749.1
44462 - 45190 (+) Oxidoreductase FAD/NAD(P)-binding domain protein
    copy AA seq
    copy Nt seq
    • MSR10575_88370
    • QRN75750.1
    45218 - 46258 (+) 3-Aminoalanin synthase
      copy AA seq
      copy Nt seq
      • MSR10575_88380
      • QRN75751.1
      46255 - 47103 (+) Acyltransferase/malonyl CoA-acyl carrier protein transacylase
        copy AA seq
        copy Nt seq
        • MSR10575_88390
        • QRN75752.1
        47100 - 47843 (+) Enoyl-CoA hydratase/isomerase
          copy AA seq
          copy Nt seq
          • MSR10575_88400
          • QRN75753.1
          47836 - 58599 (+) Polyketide synthase
            copy AA seq
            copy Nt seq
            • MSR10575_88410
            • QRN75754.1
            58596 - 69254 (+) Polyketide synthase
              copy AA seq
              copy Nt seq
              • MSR10575_88420
              • QRN75755.1
              69290 - 75655 (+) Amino acid adenylation domain protein
                copy AA seq
                copy Nt seq
                • MSR10575_88430
                • QRN75756.1
                75652 - 80040 (+) Short-chain dehydrogenase/reductase SDR
                  copy AA seq
                  copy Nt seq
                  • MSR10575_88440
                  • QRN75757.1
                  80103 - 81854 (+) halogenase
                    copy AA seq
                    copy Nt seq
                    • MSR10575_88450
                    • QRN75758.1
                    81863 - 82915 (+) Pyridoxal-phosphate dependent enzyme family
                      copy AA seq
                      copy Nt seq
                      • MSR10575_88460
                      • QRN75759.1
                      • acpP
                      82912 - 83196 (+) Acyl carrier protein
                        copy AA seq
                        copy Nt seq
                        • MSR10575_88470
                        • QRN75760.1
                        83193 - 84515 (+) Beta-ketoacyl-ACP synthase
                          copy AA seq
                          copy Nt seq
                          • MSR10575_88480
                          • QRN75761.1
                          84512 - 85747 (+) hydroxymethylglutaryl-CoA synthase
                            copy AA seq
                            copy Nt seq
                            • MSR10575_88490
                            • QRN75762.1
                            85744 - 86487 (+) Enoyl-CoA hydratase/isomerase
                              copy AA seq
                              copy Nt seq
                              • MSR10575_88500
                              • QRN75763.1
                              86591 - 87379 (+) Thioesterase
                                copy AA seq
                                copy Nt seq
                                • MSR10575_88510
                                • QRN75764.1
                                87428 - 88675 (+) FAD binding monooxygenase
                                  copy AA seq
                                  copy Nt seq
                                  Biosynthesis information

                                  Biosynthetic modules

                                  Name
                                  Unk01
                                  Type
                                  nrps-type1
                                  Genes
                                  MSR10575_88410
                                  Substrates
                                  2,3-diaminopropionic acid (evidence: Structure-based inference, Sequence-based prediction)
                                  Integrated Monomers
                                  Domains
                                  adenylation
                                  Name
                                  Unk02
                                  Type
                                  nrps-type1
                                  Genes
                                  MSR10575_88420
                                  Substrates
                                  valine (evidence: Structure-based inference [2])
                                  Integrated Monomers
                                  Domains
                                  adenylation
                                  Name
                                  Unk03
                                  Type
                                  nrps-type1
                                  Genes
                                  MSR10575_88420
                                  Substrates
                                  leucine (evidence: Structure-based inference [2])
                                  Integrated Monomers
                                  Domains
                                  adenylation
                                  Annotation changelog

                                  Entry version: next

                                  Date
                                  Changes
                                  Submitters
                                  Reviewers
                                  MIBiG v4 annotathon
                                  • (ID: FRQQORKO3VK7P3VSIR32QDKU)
                                  • (ID: 4ZBJCWV5NZUBDJXCSIV4TKIA)
                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                  Entry version: 2

                                  Date
                                  Changes
                                  Submitters
                                  Reviewers
                                  Update chemical activity to schema version 2.11
                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                  Changed chemical structures for compounds: sandarazol A.
                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                  Added compounds: sandarazol C, sandarazol E, sandarazol G, sandarazol B, sandarazol D, sandarazol F.
                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                  Added NPAtlas links to compounds: sandarazol C, sandarazol E, sandarazol G, sandarazol B, sandarazol D, sandarazol A, sandarazol F.
                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                  Entry version: 1

                                  Date
                                  Changes
                                  Submitters
                                  Reviewers
                                  Submitted
                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                  Added NRP substrate specificities
                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                  Fixed biosynthetic classes
                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                  Detailed domain annotation
                                  Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
                                  A domain glossary is available here, and an explanation of the visualisation is available here.
                                  Selected features only
                                  Show module domains
                                  Similar known gene clusters from MIBiG 4.0
                                  Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
                                  Click on reference genes to show details of similarities to genes within the current region.
                                  Click on an accession to open that entry in the MiBIG database.