BGC0002359 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

BGC0002359 (Streptomyces albus subsp. chlorinus)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1	NRPS	1	27,968	dudomycin A	NRPS:Type I	100%

BGC0002359 - Region 1 - NRPS

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Location: 1 - 27,968 nt. (total: 27,968 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

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Gene details

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Gene overview

MIBiG

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

External annotation

Name		MIBiG
Version		4.0alpha

Type		Subregion
Location		1 - 27,969
Label		BGC0002359

Detailed domain annotation

Selected features only

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Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002359	1.00	NRP	dudomycin A	Streptomyces albus subsp. chlorinus
BGC0002075	0.32	NRP, Alkaloid	pyreudione A, pyreudione B, pyreudione C, pyreudione D, pyreudione E	Pseudomonas fluorescens
BGC0002415	0.27	NRP	vanchrobactin, trivanchrobactin, divanchrobactin	Vibrio campbellii
BGC0002685	0.26	NRP	enterobactin	Rothia mucilaginosa ATCC 25296
BGC0002528	0.25	NRP	aminochelin, azotochelin, protochelin	Azotobacter vinelandii CA
BGC0001825	0.25	NRP	xenematide	Xenorhabdus nematophila AN6/1
BGC0001132	0.25	NRP	xenotetrapeptide	Xenorhabdus nematophila ATCC 19061
BGC0002286	0.25	NRP	ririwpeptide A, ririwpeptide B, ririwpeptide C	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001758	0.24	NRP	rhizomide A, rhizomide B, rhizomide C	Paraburkholderia rhizoxinica HKI 454
BGC0001833	0.24	NRP	icosalide A, icosalide B	Burkholderia gladioli

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002359	1.00	NRP	dudomycin A	Streptomyces albus subsp. chlorinus
BGC0002075	0.65	NRP, Alkaloid	pyreudione A, pyreudione B, pyreudione C, pyreudione D, pyreudione E	Pseudomonas fluorescens
BGC0002415	0.60	NRP	vanchrobactin, trivanchrobactin, divanchrobactin	Vibrio campbellii
BGC0002685	0.60	NRP	enterobactin	Rothia mucilaginosa ATCC 25296
BGC0002528	0.59	NRP	aminochelin, azotochelin, protochelin	Azotobacter vinelandii CA
BGC0001825	0.59	NRP	xenematide	Xenorhabdus nematophila AN6/1
BGC0001132	0.58	NRP	xenotetrapeptide	Xenorhabdus nematophila ATCC 19061
BGC0002286	0.58	NRP	ririwpeptide A, ririwpeptide B, ririwpeptide C	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001758	0.58	NRP	rhizomide A, rhizomide B, rhizomide C	Paraburkholderia rhizoxinica HKI 454
BGC0001833	0.57	NRP	icosalide A, icosalide B	Burkholderia gladioli

Similar known gene clusters from MIBiG 4.0

Module view

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NRPS/PKS products

NRPS/PKS substrates

Predicted core structure(s)

For candidate cluster 1, location 0 - 27968:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (Lys)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS substrate predictions

FM076_21195

Search NORINE for peptide: strict or relaxed

AMP-binding (535..930): Lys

nrpys: Lys

SVM prediction details:

Predicted physicochemical class:: hydrophilic (Arg, Asp, Glu, Asn, Lys, Gln, Orn, Aad)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DTEDMGYVDK
Nearest Stachelhaus code(s):: Lys DTEDMGYVDK (100% 8Å match); Orn DTEDMGYVDK (79% 8Å match)
Stachelhaus code match:: 100% (strong)