BGC0002359: dudomycin A biosynthetic gene cluster from Streptomyces albus subsp. chlorinus
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
View antiSMASH-generated output
Download Cluster GenBank file
Download region SVG
Location: 4,756,396 - 4,784,363 nt. (total: 27,968 nt).
This entry is originally from NCBI GenBank VJOK01000001.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
TTA codons
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
Biosynthesis
History
NRPS/PKS domains
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0002359
Short description dudomycin A biosynthetic gene cluster from Streptomyces albus subsp. chlorinus
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • NRPS (Type I)
Loci
VJOK01000001.1
4756396 - 4784363
via Heterologous expression, Knock-out studies
Compounds
  • dudomycin A
Species Streptomyces albus subsp. chlorinus [taxonomy]
References
Chemical products information
dudomycin A Evidence:
Copy SMILES
Chemical database entries
NPAtlas
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • FM076_21110
 4756414 - 4757724 (+) acylneuraminate cytidylyltransferase
    copy AA seq
    copy Nt seq
    • FM076_21115
    • NSC23515.1
    		 4757897 - 4758841 (+) N-acetylneuraminate synthase
      copy AA seq
      copy Nt seq
      • FM076_21120
      • NSC23516.1
      		 4759003 - 4760070 (+) hypothetical protein
        copy AA seq
        copy Nt seq
        • FM076_21125
        • NSC23517.1
        		 4760261 - 4761553 (+) amidohydrolase
          copy AA seq
          copy Nt seq
          • FM076_21130
          • NSC23518.1
          		 4761856 - 4762890 (+) BMP family ABC transporter substrate-binding protein
            copy AA seq
            copy Nt seq
            • FM076_21135
            • NSC23519.1
            		 4763038 - 4764756 (+) ABC transporter ATP-binding protein
              copy AA seq
              copy Nt seq
              • FM076_21140
              • NSC23520.1
              		 4764753 - 4765889 (+) ABC transporter permease
                copy AA seq
                copy Nt seq
                • FM076_21145
                • NSC23521.1
                		 4765886 - 4767199 (+) ABC transporter permease
                  copy AA seq
                  copy Nt seq
                  • FM076_21150
                  • NSC23522.1
                  		 4767295 - 4767678 (+) cytidine deaminase
                    copy AA seq
                    copy Nt seq
                    • FM076_21155
                    • NSC23523.1
                    		 4767725 - 4768999 (+) thymidine phosphorylase
                      copy AA seq
                      copy Nt seq
                      • FM076_21160
                      • NSC23524.1
                      		 4770014 - 4770259 (+) hypothetical protein
                        copy AA seq
                        copy Nt seq
                        • FM076_21165
                        • NSC23525.1
                        		 4770228 - 4770752 (+) hypothetical protein
                          copy AA seq
                          copy Nt seq
                          • FM076_21170
                          • NSC23526.1
                          		 4770779 - 4771627 (+) helix-turn-helix domain-containing protein
                            copy AA seq
                            copy Nt seq
                            • FM076_21175
                            • NSC23527.1
                            		 4771937 - 4772137 (+) hypothetical protein
                              copy AA seq
                              copy Nt seq
                              • FM076_21180
                              • NSC23528.1
                              		 4772704 - 4773210 (+) hypothetical protein
                                copy AA seq
                                copy Nt seq
                                • FM076_21185
                                • NSC23529.1
                                		 4773302 - 4773964 (+) class I SAM-dependent methyltransferase
                                  copy AA seq
                                  copy Nt seq
                                  • FM076_21190
                                  		 4774092 - 4774444 (+) metallopeptidase family protein
                                    copy AA seq
                                    copy Nt seq
                                    • FM076_21195
                                    • NSC23530.1
                                    		 4774808 - 4778923 (-) amino acid adenylation domain-containing protein
                                      copy AA seq
                                      copy Nt seq
                                      • FM076_21200
                                      • NSC23531.1
                                      		 4779065 - 4780363 (-) MFS transporter
                                        copy AA seq
                                        copy Nt seq
                                        • FM076_21205
                                        • NSC23532.1
                                        		 4780467 - 4781456 (+) LysR family transcriptional regulator
                                          copy AA seq
                                          copy Nt seq
                                          • FM076_21210
                                          • NSC23533.1
                                          		 4781453 - 4782454 (+) class I SAM-dependent methyltransferase
                                            copy AA seq
                                            copy Nt seq
                                            • FM076_21215
                                            • NSC23534.1
                                            		 4782621 - 4783289 (-) hypothetical protein
                                              copy AA seq
                                              copy Nt seq
                                              • FM076_21220
                                              • NSC23535.1
                                              		 4783527 - 4784363 (-) alpha/beta hydrolase
                                                copy AA seq
                                                copy Nt seq
                                                Biosynthesis information

                                                Biosynthetic modules

                                                Name
                                                Unk01
                                                Type
                                                nrps-type1
                                                Genes
                                                FM076_21195
                                                Substrates
                                                lysine (evidence: Structure-based inference [2])
                                                Integrated Monomers
                                                Domains
                                                adenylation
                                                Annotation changelog

                                                Entry version: 2

                                                Date
                                                Changes
                                                Submitters
                                                Reviewers
                                                2022-10-07
                                                Changed chemical structures for compounds: dudomycin A.
                                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                2022-10-07
                                                Added NPAtlas links to compounds: dudomycin A.
                                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                                Entry version: 1

                                                Date
                                                Changes
                                                Submitters
                                                Reviewers
                                                2022-09-15
                                                Entry added
                                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                2022-09-15
                                                Added NRP substrate specificities
                                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                Detailed domain annotation
                                                Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
                                                A domain glossary is available here, and an explanation of the visualisation is available here.
                                                Selected features only
                                                Show module domains
                                                Similar known gene clusters from MIBiG 4.0
                                                Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
                                                Click on reference genes to show details of similarities to genes within the current region.
                                                Click on an accession to open that entry in the MiBIG database.