BGC0002387: yangpumicin A biosynthetic gene cluster from Micromonospora yangpuensis
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Location: 3,872,505 - 3,913,761 nt. (total: 41,257 nt).
This entry is originally from NCBI GenBank FMIA01000002.1.

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core biosynthetic genes
additional biosynthetic genes
transport-related genes
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TTA codons
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Gene details
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General
Compounds
Genes
History
NRPS/PKS domains
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0002387
Short description yangpumicin A biosynthetic gene cluster from Micromonospora yangpuensis
Status Minimal annotation: yes
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: Unknown
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • Polyketide
Loci NCBI GenBank: FMIA01000002.1
Compounds
  • yangpumicin A
Species Micromonospora yangpuensis [taxonomy]
References
Chemical products information
yangpumicin A
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Chemical database entries
NPAtlas
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • GA0070617_3538
  • SCL57485.1
 3872506 - 3872916 (-) hypothetical protein
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  • GA0070617_3539
  • SCL57488.1
 3872987 - 3873244 (-) toxin YoeB
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  • GA0070617_3540
  • SCL57493.1
 3873466 - 3873744 (+) prevent-host-death family protein
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  • GA0070617_3541
  • SCL57494.1
 3873741 - 3874151 (+) Predicted nucleic acid-binding protein, contains PIN domain
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  • GA0070617_3542
  • SCL57497.1
 3874403 - 3875977 (-) DNA polymerase-3 subunit epsilon
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  • GA0070617_3543
  • SCL57501.1
 3876074 - 3877837 (+) sporadically distributed protein, TIGR04141 family
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  • GA0070617_3544
  • SCL57502.1
 3877956 - 3878414 (+) hypothetical protein
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  • GA0070617_3546
  • SCL57507.1
 3879527 - 3879997 (-) protein of unknown function
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  • GA0070617_3547
  • SCL57511.1
 3880081 - 3881079 (-) lipid kinase, YegS/Rv2252/BmrU family
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  • GA0070617_3548
  • SCL57515.1
 3881210 - 3881809 (-) LysM domain-containing protein
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  • GA0070617_3549
  • SCL57517.1
 3882243 - 3882527 (+) hypothetical protein
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  • GA0070617_3550
  • SCL57521.1
 3882584 - 3884113 (-) DNA-binding transcriptional activator of the SARP family
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  • GA0070617_3551
  • SCL57524.1
 3884327 - 3885316 (+) Protein of unknown function
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  • GA0070617_3552
  • SCL57527.1
 3885336 - 3887225 (+) Repeat domain-containing protein
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  • GA0070617_3553
  • SCL57531.1
 3887252 - 3888259 (+) hypothetical protein
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  • GA0070617_3554
  • SCL57535.1
 3888287 - 3893989 (+) enediyne polyketide synthase
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  • GA0070617_3555
  • SCL57538.1
 3893992 - 3894426 (+) enediyne biosynthesis thioesterase
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  • GA0070617_3556
  • SCL57541.1
 3894459 - 3895151 (-) transcriptional regulator, HxlR family
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  • GA0070617_3557
  • SCL57545.1
 3895257 - 3897149 (-) Predicted ATPase
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  • GA0070617_3558
  • SCL57548.1
 3897280 - 3898641 (+) ubiquinone biosynthesis protein
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  • GA0070617_3559
  • SCL57552.1
 3898688 - 3899272 (+) hypothetical protein
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  • GA0070617_3560
  • SCL57556.1
 3899269 - 3899802 (+) hypothetical protein
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  • GA0070617_3561
  • SCL57559.1
 3899862 - 3900971 (-) Uncharacterized conserved protein YndB, AHSA1/START domain
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  • GA0070617_3562
  • SCL57561.1
 3901092 - 3901724 (-) hypothetical protein
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  • GA0070617_3563
  • SCL57563.1
 3901743 - 3903068 (-) HEAT repeat-containing protein
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  • GA0070617_3564
  • SCL57566.1
 3903215 - 3904744 (+) KR domain-containing protein
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  • GA0070617_3565
  • SCL57569.1
 3904744 - 3905595 (+) Uncharacterized conserved protein YndB, AHSA1/START domain
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  • GA0070617_3566
  • SCL57573.1
 3905592 - 3906449 (+) transcriptional regulator, AraC family
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  • GA0070617_3567
  • SCL57575.1
 3906535 - 3907743 (-) 2-polyprenyl-6-methoxyphenol hydroxylase
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  • GA0070617_3568
  • SCL57580.1
 3907740 - 3909050 (-) ubiquinone biosynthesis protein
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  • GA0070617_3569
  • SCL57581.1
 3909278 - 3910414 (+) Methyltransferase domain-containing protein
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  • GA0070617_3570
  • SCL57586.1
 3910429 - 3910863 (+) Predicted ester cyclase
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  • GA0070617_3571
  • SCL57589.1
 3910874 - 3912331 (+) alpha/beta hydrolase fold
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  • GA0070617_3572
  • SCL57594.1
 3912328 - 3913761 (+) TAP-like protein
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Annotation changelog
MIBiG version Submitter Notes
3.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Entry added
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