BGC0002405: mid-chain acyl sugars biosynthetic gene cluster from Solanum lycopersicum
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 57,739,270 - 57,782,130 nt. (total: 42,861 nt).
This entry is originally from NCBI GenBank GPC_000003965.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
Biosynthesis
History
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0002405
Short description mid-chain acyl sugars biosynthetic gene cluster from Solanum lycopersicum
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • saccharide (None)
Loci
GPC_000003965.1
57739270 - 57782130
via
Compounds
  • mid-chain acyl sugars
Species Solanum lycopersicum [taxonomy]
References
Chemical products information
mid-chain acyl sugars Evidence:
(no structure information available)
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • XP_004243626.1
  • LOC101250819
57756582 - 57758452 (+) probable acyl-activating enzyme 1, peroxisomal
    copy AA seq
    copy Nt seq
    • XP_004243893.1
    • LOC101246842
    57763292 - 57764587 (-) acylsugar acyltransferase 3-like
      copy AA seq
      copy Nt seq
      • XP_004243624.1
      • LOC101250233
      57773270 - 57775434 (+) 3-hydroxyisobutyryl-CoA hydrolase-like protein 5
        copy AA seq
        copy Nt seq
        • XP_019070278.1
        • LOC109120718
        57781339 - 57782130 (-) uncharacterized protein LOC109120718
          copy AA seq
          copy Nt seq
          Biosynthesis information
          Annotation changelog

          Entry version: 1

          Date
          Changes
          Submitters
          Reviewers
          Entry added
          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
          Similar known gene clusters from MIBiG 4.0
          Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
          Click on reference genes to show details of similarities to genes within the current region.
          Click on an accession to open that entry in the MiBIG database.