BGC0002420: vacidobactin A biosynthetic gene cluster from Variovorax paradoxus S110
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Location: 3,917,565 - 3,987,391 nt. (total: 69,827 nt).
This entry is originally from NCBI GenBank CP001635.1.

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core biosynthetic genes
additional biosynthetic genes
transport-related genes
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resistance
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General
Compounds
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Biosynthesis
History
KnownClusterBlast
NRPS/PKS domains
General information about the BGC
MIBiG accession BGC0002420
Short description vacidobactin A biosynthetic gene cluster from Variovorax paradoxus S110
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • NRPS (Type I)
  • PKS (Unknown)
Loci
CP001635.1
3932878 - 3970005
via
Compounds
  • vacidobactin A
  • vacidobactin B
Species Variovorax paradoxus S110 [taxonomy]
References
Chemical products information
vacidobactin A Evidence:
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Chemical database entries
NPAtlas
vacidobactin B Evidence:
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Chemical database entries
NPAtlas
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • Vapar_3735
  • ACS20351.1
 3932645 - 3932881 (-) hypothetical protein
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    • Vapar_3736
    • ACS20352.1
    		 3932878 - 3934569 (-) cyclic peptide transporter
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      • Vapar_3737
      • ACS20353.1
      		 3934702 - 3935547 (+) ferric iron reductase
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        • Vapar_3738
        • ACS20354.1
        		 3935645 - 3936490 (+) conserved hypothetical protein
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          • Vapar_3739
          • ACS20355.1
          		 3936487 - 3937521 (+) conserved hypothetical protein
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            • Vapar_3740
            • ACS20356.1
            		 3937565 - 3938884 (+) L-lysine 6-monooxygenase (NADPH)
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              • Vapar_3741
              • ACS20357.1
              		 3939045 - 3941216 (+) TonB-dependent siderophore receptor
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                • Vapar_3742
                • ACS20358.1
                		 3941204 - 3945280 (-) amino acid adenylation domain protein
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                  • Vapar_3743
                  • ACS20359.1
                  		 3945277 - 3953157 (-) amino acid adenylation domain protein
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                    • Vapar_3744
                    • ACS20360.1
                    		 3953157 - 3956489 (-) amino acid adenylation domain protein
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                      • Vapar_3745
                      • ACS20361.1
                      		 3956486 - 3961048 (-) KR domain protein
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                        • Vapar_3746
                        • ACS20362.1
                        		 3961048 - 3966378 (-) amino acid adenylation domain protein
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                          • Vapar_3747
                          • ACS20363.1
                          		 3966399 - 3967391 (-) Taurine catabolism dioxygenase TauD/TfdA
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                            • Vapar_3748
                            • ACS20364.1
                            		 3967388 - 3968077 (-) 4'-phosphopantetheinyl transferase
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                              • Vapar_3749
                              • ACS20365.1
                              		 3968055 - 3968795 (-) Thioesterase
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                                • Vapar_3750
                                • ACS20366.1
                                		 3968801 - 3969058 (-) MbtH domain protein
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                                  • Vapar_3751
                                  • ACS20367.1
                                  		 3969160 - 3969363 (-) anti-FecI sigma factor, FecR
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                                    • Vapar_3752
                                    • ACS20368.1
                                    		 3969460 - 3970005 (-) RNA polymerase, sigma-24 subunit, ECF subfamily
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                                      Biosynthesis information

                                      No biosynthesis information available for this record.

                                      Annotation changelog

                                      Entry version: 2

                                      Date
                                      Changes
                                      Submitters
                                      Reviewers
                                      2022-10-07
                                      Added chemical structures for compounds: vacidobactin A, vacidobactin B.
                                      • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                      • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                      2022-10-07
                                      Added NPAtlas links to compounds: vacidobactin A, vacidobactin B.
                                      • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                      • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                      Entry version: 1

                                      Date
                                      Changes
                                      Submitters
                                      Reviewers
                                      2022-09-15
                                      Entry added
                                      • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                      • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
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