BGC0002495: photobactin biosynthetic gene cluster from Photorhabdus luminescens
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
View antiSMASH-generated output
Download Cluster GenBank file
Download region SVG
Location: 1,107 - 20,777 nt. (total: 19,671 nt).
This entry is originally from NCBI GenBank AY042783.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
Biosynthesis
History
NRPS/PKS domains
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0002495
Short description photobactin biosynthetic gene cluster from Photorhabdus luminescens
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • NRPS (Type I)
Loci
AY042783.1
1107 - 20777
via
Compounds
  • photobactin
Species Photorhabdus luminescens [taxonomy]
References
Chemical products information
photobactin Evidence:
Copy SMILES
Chemical database entries
NPAtlas
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • AAK95835.1
  • phbA
 1107 - 1865 (-) putative 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase PhbA
    copy AA seq
    copy Nt seq
    • AAK95836.1
    • phbB
    		 1867 - 2742 (-) putative 2,3-dihydro-2,3-dihydroxybenzoate synthase PhbB
      copy AA seq
      copy Nt seq
      • AAK95837.1
      • phbE
      		 2729 - 4372 (-) putative 2,3-dihydroxybenzoate-AMP-ligase PhbE
        copy AA seq
        copy Nt seq
        • AAK95838.1
        • phbC
        		 4410 - 5348 (-) putative isochorismate synthase PhbC
          copy AA seq
          copy Nt seq
          • AAK95839.1
          • phuC
          		 5870 - 6709 (-) ABC-transport protein PhuC
            copy AA seq
            copy Nt seq
            • AAK95840.1
            • phbH
            		 6809 - 9895 (-) nonribosomal peptide synthetase PhbH
              copy AA seq
              copy Nt seq
              • AAK95841.1
              • phuA
              		 10084 - 12144 (-) putative photobactin outer membrane receptor precursor PhuA
                copy AA seq
                copy Nt seq
                • AAK95842.1
                • phuD
                		 12783 - 13751 (-) putative cytoplasmic permease PhuD
                  copy AA seq
                  copy Nt seq
                  • AAK95843.1
                  • phuG
                  		 13843 - 14895 (-) putative cytoplasmic permease PhuG
                    copy AA seq
                    copy Nt seq
                    • AAK95844.1
                    • phuB
                    		 14919 - 15959 (-) periplasmic binding protein PhuB
                      copy AA seq
                      copy Nt seq
                      • AAK95845.1
                      • phbG
                      		 16360 - 17670 (+) putative photobactin biosynthesis protein PhbG
                        copy AA seq
                        copy Nt seq
                        • AAK95846.1
                        • phbF
                        		 17733 - 20777 (-) nonribosomal peptide synthetase PhbF
                          copy AA seq
                          copy Nt seq
                          Biosynthesis information
                          Annotation changelog

                          Entry version: 1

                          Date
                          Changes
                          Submitters
                          Reviewers
                          2022-09-15
                          Entry added
                          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                          Detailed domain annotation
                          Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
                          A domain glossary is available here, and an explanation of the visualisation is available here.
                          Selected features only
                          Show module domains
                          Similar known gene clusters from MIBiG 4.0
                          Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
                          Click on reference genes to show details of similarities to genes within the current region.
                          Click on an accession to open that entry in the MiBIG database.