BGC0002660 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

BGC0002660 (Chitinophaga eiseniae)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1	NRPS	1	23,622	pentacitidin A/pentacitidin B	NRPS:Type I	100%

BGC0002660 - Region 1 - NRPS

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Location: 1 - 23,622 nt. (total: 23,622 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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Gene details

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Gene overview

MIBiG

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

External annotation

Name		MIBiG
Version		4.0alpha

Type		Subregion
Location		1 - 23,623
Label		BGC0002660

Detailed domain annotation

Selected features only

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Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002660	1.00	NRP	pentacitidin A, pentacitidin B	Chitinophaga eiseniae
BGC0002437	0.34	NRP	thermoactinoamide A	Thermoactinomyces sp. AS95
BGC0002135	0.33	NRP	bovienimide A	Xenorhabdus bovienii SS-2004
BGC0002518	0.32	NRP	syringafactin A, syringafactin C	Pseudomonas sp. SZ57
BGC0001833	0.30	NRP	icosalide A, icosalide B	Burkholderia gladioli
BGC0001128	0.29	NRP	gamexpeptide C	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001825	0.28	NRP	xenematide	Xenorhabdus nematophila AN6/1
BGC0001135	0.28	NRP	bicornutin A1, bicornutin A2	Xenorhabdus budapestensis
BGC0002286	0.27	NRP	ririwpeptide A, ririwpeptide B, ririwpeptide C	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001844	0.27	NRP	holrhizin	Paraburkholderia rhizoxinica HKI 454

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002660	1.00	NRP	pentacitidin A, pentacitidin B	Chitinophaga eiseniae
BGC0002437	0.67	NRP	thermoactinoamide A	Thermoactinomyces sp. AS95
BGC0002135	0.66	NRP	bovienimide A	Xenorhabdus bovienii SS-2004
BGC0002518	0.66	NRP	syringafactin A, syringafactin C	Pseudomonas sp. SZ57
BGC0001833	0.63	NRP	icosalide A, icosalide B	Burkholderia gladioli
BGC0001128	0.62	NRP	gamexpeptide C	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001825	0.61	NRP	xenematide	Xenorhabdus nematophila AN6/1
BGC0001135	0.61	NRP	bicornutin A1, bicornutin A2	Xenorhabdus budapestensis
BGC0002286	0.61	NRP	ririwpeptide A, ririwpeptide B, ririwpeptide C	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001844	0.61	NRP	holrhizin	Paraburkholderia rhizoxinica HKI 454

Similar known gene clusters from MIBiG 4.0

Module view

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NRPS/PKS products

NRPS/PKS substrates

Predicted core structure(s)

For candidate cluster 1, location 0 - 23622:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (D-His - Ile - Val - Pro - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS substrate predictions

SAMN04488128_1011792

Search NORINE for peptide: strict or relaxed

AMP-binding (464..850): His

nrpys: His

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
Small clusters prediction:: Aliphatic, branched hydrophobic (Val, Leu, Ile, Abu, Ival)
Single AA prediction:: N/A