BGC0002672 - 1 region(s) - antiSMASH results

BGC0002672 (Saccharothrix sp)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1	T2PKS	1	31,770	saccharothrixin D/saccharothrixin E/saccharothrixin F/saccharothrixin G/saccharothrixin H/saccharothrixin I/saccharothrixin J/saccharothrixin K/saccharothrixin L/saccharothrixin M	PKS	100%

BGC0002672 - Region 1 - T2PKS

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Location: 1 - 31,770 nt. (total: 31,770 nt) Show pHMM detection rules used

Region on contig edge.

T2PKS: (t2ks and t2clf)

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

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Gene details

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Gene overview

MIBiG

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

External annotation

Name		MIBiG
Version		4.0alpha

Detailed domain annotation

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Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002672	1.00	Polyketide	saccharothrixin D, saccharothrixin E, saccharothrixin F, saccharothrixin G, saccharothrixin H, saccharothrixin I, saccharothrixin J, saccharothrixin K, saccharothrixin L, saccharothrixin M	Saccharothrix sp.
BGC0000231	0.58	Polyketide	griseusin A, griseusin B	Streptomyces griseus
BGC0000234	0.56	Polyketide	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0001723	0.48	Polyketide	oviedomycin	Streptomyces antibioticus
BGC0002404	0.33	Other	falcarindiol	Solanum lycopersicum
BGC0002047	0.30	Polyketide	brasiliquinone A, brasiliquinone B	Nocardia brasiliensis
BGC0000665	0.28	Terpene, Alkaloid	xiamycin	Streptomyces sp. HKI0576
BGC0002477	0.27	Polyketide	thioangucycline A, thioangucycline B	Streptomyces sp. CB00072
BGC0002504	0.26	Polyketide	nocardiopsistin A, nocardiopsistin B, nocardiopsistin C	Nocardiopsis sp.
BGC0002070	0.25	Polyketide	SEK90, pentangumycin	Saccharothrix espanaensis DSM 44229

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002672	1.00	Polyketide	saccharothrixin D, saccharothrixin E, saccharothrixin F, saccharothrixin G, saccharothrixin H, saccharothrixin I, saccharothrixin J, saccharothrixin K, saccharothrixin L, saccharothrixin M	Saccharothrix sp.
BGC0000231	0.83	Polyketide	griseusin A, griseusin B	Streptomyces griseus
BGC0000234	0.82	Polyketide	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0001723	0.77	Polyketide	oviedomycin	Streptomyces antibioticus
BGC0002404	0.66	Other	falcarindiol	Solanum lycopersicum
BGC0002047	0.64	Polyketide	brasiliquinone A, brasiliquinone B	Nocardia brasiliensis
BGC0000665	0.61	Terpene, Alkaloid	xiamycin	Streptomyces sp. HKI0576
BGC0002477	0.60	Polyketide	thioangucycline A, thioangucycline B	Streptomyces sp. CB00072
BGC0002504	0.60	Polyketide	nocardiopsistin A, nocardiopsistin B, nocardiopsistin C	Nocardiopsis sp.
BGC0002070	0.59	Polyketide	SEK90, pentangumycin	Saccharothrix espanaensis DSM 44229

Similar known gene clusters from MIBiG 4.0

Type II PKS

Type II PKS gene cluster prediction details

sxnA1: CYC C4-C17/C2-C19 (Score: 193.5; E-value: 8e-60)
sxnA2: KS (Score: 791.7; E-value: 3.3e-241)
sxnA3: CLF 8|9 (Score: 688.7; E-value: 4.8e-210)
sxnA4: ACP (Score: 132.2; E-value: 1.2e-41)
sxnA5: KR C9 (Score: 474.1; E-value: 2.5e-145)
sxnA6: CYC C7-C12 (Score: 492.8; E-value: 7.3e-151)
sxnO1: OXY (Score: 594.2; E-value: 4.5e-181)
sxnO2: OXY (Score: 534.7; E-value: 5.2e-163)
sxnO5: KR (Score: 128.9; E-value: 6.2e-40)
sxnO8: KR (Score: 139.0; E-value: 5e-43)