BGC0002712 - 1 region(s) - antiSMASH results

BGC0002712 (Actinacidiphila yanglinensis)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1	T2PKS	1	26,722	WS-5995 D/WS-5995 B/WS-5995 C/SEK 43	PKS	100%

BGC0002712 - Region 1 - T2PKS

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Location: 1 - 26,722 nt. (total: 26,722 nt) Show pHMM detection rules used

Region on contig edge.

T2PKS: (t2ks and t2clf)

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

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Gene details

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Gene overview

MIBiG

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

External annotation

Name		MIBiG
Version		4.0alpha

Detailed domain annotation

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Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002712	1.00	Polyketide	WS-5995 D, WS-5995 B, WS-5995 C, SEK 43	Streptomyces yanglinensis
BGC0000231	0.58	Polyketide	griseusin A, griseusin B	Streptomyces griseus
BGC0001723	0.47	Polyketide	oviedomycin	Streptomyces antibioticus
BGC0000234	0.47	Polyketide	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0002404	0.31	Other	falcarindiol	Solanum lycopersicum
BGC0001928	0.30	Other	(2R,3S,4S)-5-fluoro-2,3,4-trihydroxypentanoic acid	Streptomyces sp. MA37
BGC0002496	0.29	NRP	serratiochelin A, serratiochelin C, serratiochelin B	Serratia plymuthica
BGC0000235	0.29	Polyketide	kiamycin	Streptomyces sp. W007
BGC0002477	0.28	Polyketide	thioangucycline A, thioangucycline B	Streptomyces sp. CB00072
BGC0000888	0.27	Other	bacilysin	Bacillus sp. CS93

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002712	1.00	Polyketide	WS-5995 D, WS-5995 B, WS-5995 C, SEK 43	Streptomyces yanglinensis
BGC0000231	0.83	Polyketide	griseusin A, griseusin B	Streptomyces griseus
BGC0001723	0.77	Polyketide	oviedomycin	Streptomyces antibioticus
BGC0000234	0.77	Polyketide	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0002404	0.65	Other	falcarindiol	Solanum lycopersicum
BGC0001928	0.64	Other	(2R,3S,4S)-5-fluoro-2,3,4-trihydroxypentanoic acid	Streptomyces sp. MA37
BGC0002496	0.63	NRP	serratiochelin A, serratiochelin C, serratiochelin B	Serratia plymuthica
BGC0000235	0.62	Polyketide	kiamycin	Streptomyces sp. W007
BGC0002477	0.62	Polyketide	thioangucycline A, thioangucycline B	Streptomyces sp. CB00072
BGC0000888	0.61	Other	bacilysin	Bacillus sp. CS93

Similar known gene clusters from MIBiG 4.0

Type II PKS

Type II PKS gene cluster prediction details

SAMN05216223_118100: CYC C7-C12 (Score: 469.6; E-value: 8.3e-144)
SAMN05216223_118101: OXY (Score: 532.4; E-value: 2.5e-162)
SAMN05216223_118103: MET (Score: 296.2; E-value: 7.1e-91)
SAMN05216223_11889: OXY (Score: 394.0; E-value: 2.5e-120)
SAMN05216223_11890: KR (Score: 168.8; E-value: 4.1e-52)
SAMN05216223_11894: OXY (Score: 598.1; E-value: 2.9e-182)
SAMN05216223_11895: CYC C4-C17/C2-C19 (Score: 190.1; E-value: 8.9e-59)
SAMN05216223_11896: KS (Score: 796.1; E-value: 1.5e-242)
SAMN05216223_11897: CLF 8|9 (Score: 692.1; E-value: 4.4e-211)
SAMN05216223_11898: ACP (Score: 125.7; E-value: 1.2e-39)
SAMN05216223_11899: KR C9 (Score: 467.0; E-value: 3.7e-143)