BGC0000256 - 1 region(s) - antiSMASH results

BGC0000256 (Actinomadura hibisca)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1	T2PKS	1	37,100	lysolipin I	Polyketide	30%

BGC0000256 - Region 1 - T2PKS

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Location: 1 - 37,100 nt. (total: 37,100 nt) Show pHMM detection rules used

Region on contig edge.

T2PKS: (t2ks and t2clf)

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

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Gene details

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MIBiG

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

External annotation

Name		MIBiG
Version		3.0

Detailed domain annotation

Selected features only

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Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000256.1	1.00	Polyketide	pradimicin-A	Actinomadura hibisca
BGC0000231.1	0.36	Polyketide	griseusin	Streptomyces griseus
BGC0000248.1	0.35	Polyketide	naphtocyclinone	Streptomyces arenae
BGC0000215.1	0.32	Polyketide	curamycin	Streptomyces cyaneus
BGC0002031.1	0.32	Alkaloid	kitasetaline	Kitasatospora setae KM-6054
BGC0000272.1	0.29	Polyketide	spore pigment	Streptomyces collinus
BGC0000228.1	0.28	Polyketide	granaticin	Streptomyces violaceoruber
BGC0000846.1	0.28	Other	tabtoxin	Pseudomonas syringae
BGC0001723.1	0.27	Polyketide	oviedomycin	Streptomyces antibioticus
BGC0001739.1	0.27	Other	phosphonoacetic Acid	Streptomyces sp. NRRL F-525

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000256.1	1.00	Polyketide	pradimicin-A	Actinomadura hibisca
BGC0000231.1	0.69	Polyketide	griseusin	Streptomyces griseus
BGC0000248.1	0.68	Polyketide	naphtocyclinone	Streptomyces arenae
BGC0000215.1	0.65	Polyketide	curamycin	Streptomyces cyaneus
BGC0002031.1	0.65	Alkaloid	kitasetaline	Kitasatospora setae KM-6054
BGC0000272.1	0.62	Polyketide	spore pigment	Streptomyces collinus
BGC0000228.1	0.61	Polyketide	granaticin	Streptomyces violaceoruber
BGC0000846.1	0.61	Other	tabtoxin	Pseudomonas syringae
BGC0001723.1	0.61	Polyketide	oviedomycin	Streptomyces antibioticus
BGC0001739.1	0.61	Other	phosphonoacetic Acid	Streptomyces sp. NRRL F-525

Similar known gene clusters

Type II PKS

Type II PKS gene cluster prediction details

Cluster section:: 0 to 37100
Starter unit(s):: malonamyl-CoA (Score: 625.0; E-value: 0)
Malonyl elongations:: 11|12 (Score: 679.7; E-value: 2.6e-207)
Product class(es):: pentangular polyphenol
Product molecular weight(s):: malonamyl-CoA_11: 876.87 Da
malonamyl-CoA_12: 918.91 Da

pdmA: KS (Score: 775.5; E-value: 2.7e-236)
pdmB: CLF 11|12 (Score: 679.7; E-value: 2.6e-207)
pdmC: ACP (Score: 102.7; E-value: 2e-32)
pdmD: CYC C9-C14 (Score: 246.2; E-value: 2.3e-76)
pdmF: MET C11O (Score: 527.4; E-value: 3e-161)
pdmG: KR C19 (Score: 387.1; E-value: 7.8e-119)
pdmK: CYC C4-C21/C2-C23|C2-C19 (Score: 136.6; E-value: 6.8e-43)
pdmL: CYC C5-C18 (Score: 219.9; E-value: 2e-68)
pdmN: AMID (Score: 844.6; E-value: 8.7e-257); AMID ADE34521.1_SF2575_malonamyl-CoA (Score: 625.0; E-value: 0.0)
pdmQ: GT (Score: 239.5; E-value: 1.9e-73)
pdmS: GT (Score: 299.2; E-value: 1.4e-91)
pdmT: MET C13O|C17O (Score: 503.5; E-value: 5.2e-154)