BGC0000259: prodigiosin biosynthetic gene cluster from Serratia marcescens
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 1 - 24,834 nt. (total: 24,834 nt).
This entry is originally from NCBI GenBank AJ833002.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
History
NRPS/PKS domains
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0000259
Short description prodigiosin biosynthetic gene cluster from Serratia marcescens
Status Minimal annotation: yes
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: Unknown
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • Polyketide
Loci NCBI GenBank: AJ833002.1
Compounds
  • prodigiosin
Species Serratia marcescens [taxonomy]
References
Chemical products information
prodigiosin
Copy SMILES
C20H25N3O1
Chemical database entries
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • CAH55645.1
  • cueR
168 - 575 (-) putative transcriptional regulator of CopA
copy AA seq
copy Nt seq
  • CAH55646.1
  • pigA
982 - 2139 (+) putative acyl-CoA dehydrogenase
copy AA seq
copy Nt seq
  • CAH55647.1
  • pigB
2136 - 4151 (+) hypothetical protein
copy AA seq
copy Nt seq
  • CAH55648.1
  • pigC
4148 - 6814 (+) putative phosphoenolpyruvate-utilizing enzyme
copy AA seq
copy Nt seq
  • CAH55649.1
  • pigD
6877 - 9591 (+) hypothetical protein
copy AA seq
copy Nt seq
  • CAH55650.1
  • pigE
9588 - 12149 (+) putative aminotransferase
copy AA seq
copy Nt seq
  • CAH55651.1
  • pigF
12160 - 13176 (+) putative O-methyl transferase
copy AA seq
copy Nt seq
  • CAH55652.1
  • pigG
13200 - 13463 (+) putative peptidyl carrier protein
copy AA seq
copy Nt seq
  • CAH55653.1
  • pigH
13460 - 15406 (+) putative aminotransferase
copy AA seq
copy Nt seq
  • CAH55654.1
  • pigI
15411 - 16883 (+) putative L-prolyl-AMP ligase
copy AA seq
copy Nt seq
  • CAH55655.1
  • pigJ
16880 - 19168 (+) putative Beta-ketomyristol-ACP synthase
copy AA seq
copy Nt seq
  • CAH55656.1
  • pigK
19182 - 19496 (+) hypothetical protein
copy AA seq
copy Nt seq
  • CAH55657.1
  • pigL
19480 - 20127 (+) putative 4'-phosphopantetheinyl transferase
copy AA seq
copy Nt seq
  • CAH55658.1
  • pigM
20124 - 21182 (+) hypothetical protein
copy AA seq
copy Nt seq
  • CAH55659.1
  • pigN
21201 - 21929 (+) putative oxidoreductase
copy AA seq
copy Nt seq
  • CAH55660.1
  • copA
22123 - 24834 (+) putative copper transporting P-type ATPase efflux pump
copy AA seq
copy Nt seq
Annotation changelog
MIBiG version Submitter Notes
1.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Submitted
2.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Migrated from v1.4
Detailed domain annotation
Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
A glossary is available here.
Selected features only
Show module domains
Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.