BGC0000265: rhodomycin biosynthetic gene cluster from Streptomyces purpurascens
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
View antiSMASH-generated output
Download Cluster GenBank file
Download region SVG
Location: 1 - 12,970 nt. (total: 12,970 nt).
This entry is originally from NCBI GenBank U10405.2.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
TTA codons
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
Biosynthesis
History
NRPS/PKS domains
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0000265
Short description rhodomycin biosynthetic gene cluster from Streptomyces purpurascens
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • PKS (Unknown)
Loci
U10405.2
via
Compounds
  • rhodomycin
Species Streptomyces purpurascens [taxonomy]
References
Chemical products information
rhodomycin Evidence:
Copy SMILES
C36H48N2O12
Chemical database entries
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • AAA83420.1
  • rdmA
 1 - 432 (+) RdmA
    copy AA seq
    copy Nt seq
    • AAA83421.1
    • rdmB
    		 474 - 1598 (+) RdmB
      copy AA seq
      copy Nt seq
      • AAA83422.1
      • rdmC
      		 1603 - 2499 (+) RdmC
        copy AA seq
        copy Nt seq
        • AAA83423.1
        • rdmD
        		 2532 - 3245 (+) RdmD
          copy AA seq
          copy Nt seq
          • AAA83424.1
          • rdmE
          		 3317 - 4924 (+) RdmE
            copy AA seq
            copy Nt seq
            • AAA83425.2
            • rdmF
            		 5030 - 6070 (-) RdmF
              copy AA seq
              copy Nt seq
              • AAL24449.1
              • rdmG
              		 6233 - 7648 (+) RdmG
                copy AA seq
                copy Nt seq
                • AAL24450.1
                • rdmH
                		 7645 - 8931 (+) RdmH
                  copy AA seq
                  copy Nt seq
                  • AAL24451.1
                  • rdmI
                  		 8943 - 10244 (+) RdmI
                    copy AA seq
                    copy Nt seq
                    • AAL24452.1
                    • rdmJ
                    		 10252 - 11046 (+) RdmJ
                      copy AA seq
                      copy Nt seq
                      • AAL24453.1
                      • rdmK
                      		 11055 - 12413 (+) RdmK
                        copy AA seq
                        copy Nt seq
                        • AAL24454.1
                        • rdmL
                        		 12889 - >12969 (-) RdmL
                          copy AA seq
                          copy Nt seq
                          Biosynthesis information
                          Annotation changelog

                          Entry version: 4

                          Date
                          Changes
                          Submitters
                          Reviewers
                          2022-10-07
                          Update chemical activity to schema version 2.11
                          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                          Entry version: 3

                          Date
                          Changes
                          Submitters
                          Reviewers
                          2022-09-15
                          Updated bioactivity data
                          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                          Entry version: 2

                          Date
                          Changes
                          Submitters
                          Reviewers
                          2019-10-16
                          Migrated from v1.4
                          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                          Entry version: 1

                          Date
                          Changes
                          Submitters
                          Reviewers
                          2015-06-12
                          Submitted
                          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                          Detailed domain annotation
                          Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
                          A domain glossary is available here, and an explanation of the visualisation is available here.
                          Selected features only
                          Show module domains
                          Similar known gene clusters from MIBiG 4.0
                          Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
                          Click on reference genes to show details of similarities to genes within the current region.
                          Click on an accession to open that entry in the MiBIG database.