BGC0000405: δ-(L-α-aminoadipyl)-L-cysteine-D-valine biosynthetic gene cluster from Penicillium chrysogenum
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 1 - 59,497 nt. (total: 59,497 nt).
This entry is originally from NCBI GenBank EF601124.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
Biosynthesis
History
NRPS/PKS domains
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0000405
Short description δ-(L-α-aminoadipyl)-L-cysteine-D-valine biosynthetic gene cluster from Penicillium chrysogenum
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: complete
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • NRPS (Type I)
Loci
EF601124.1
via Enzymatic assays
Compounds
  • δ-(L-α-aminoadipyl)-L-cysteine-D-valine
  • isopenicillin N
  • benzylpenicillin
  • phenoxymethylpenicillin
Species Penicillium chrysogenum [taxonomy]
References
Chemical products information
δ-(L-α-aminoadipyl)-L-cysteine-D-valine Evidence:
Copy SMILES
C14H24N3O6S1
Chemical database entries
ChEBI
isopenicillin N Evidence:
Copy SMILES
C14H21N3O6S1
Chemical database entries
ChEBI
benzylpenicillin Evidence:
Copy SMILES
C16H17N2Na1O4S1
Chemical database entries
ChEBI
phenoxymethylpenicillin Evidence:
(no structure information available)
C16H18N2O5S1
Chemical database entries
ChEMBL
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • ABR12607.1
1 - 1659 (-) isoamyl alcohol oxidase
    copy AA seq
    copy Nt seq
    • ABR12608.1
    4468 - 5130 (-) hypothetical protein
      copy AA seq
      copy Nt seq
      • ABR12609.1
      5821 - 7011 (-) hypothetical protein
        copy AA seq
        copy Nt seq
        • ABR12610.1
        7456 - 8991 (+) hypothetical protein
          copy AA seq
          copy Nt seq
          • ABR12611.1
          9836 - 12187 (+) hypothetical protein
            copy AA seq
            copy Nt seq
            • ABR12612.1
            14735 - 15622 (+) hypothetical protein
              copy AA seq
              copy Nt seq
              • ABR12613.1
              16080 - 17960 (-) hypothetical protein
                copy AA seq
                copy Nt seq
                • ABR12614.1
                18585 - 20930 (-) hypothetical protein
                  copy AA seq
                  copy Nt seq
                  • ABR12615.1
                  • pcbAB
                  25677 - 37052 (-) ACV synthetase
                  • Scaffold biosynthesis
                  • Mutation phenotype: <mibig.converters.shared.mibig.gene.function.MutationPhenotype object at 0x7f568a72bf50>
                  • Activity assay
                  copy AA seq
                  copy Nt seq
                  • ABR12616.1
                  • pcbC
                  38068 - 39063 (+) IPN synthase
                  • Tailoring
                  • Mutation phenotype: <mibig.converters.shared.mibig.gene.function.MutationPhenotype object at 0x7f568a765710>
                  • Activity assay
                  copy AA seq
                  copy Nt seq
                  • ABR12617.1
                  • penDE
                  40561 - 41835 (+) IPN:acyltransferase
                  • Tailoring
                  • Mutation phenotype: <mibig.converters.shared.mibig.gene.function.MutationPhenotype object at 0x7f568a767fd0>
                  • Activity assay
                  copy AA seq
                  copy Nt seq
                  • ABR12618.1
                  42849 - 43628 (-) probable oxidoreductase
                    copy AA seq
                    copy Nt seq
                    • ABR12619.1
                    44942 - 46297 (+) hypothetical protein
                      copy AA seq
                      copy Nt seq
                      • ABR12620.1
                      49317 - 49781 (+) hypothetical protein
                        copy AA seq
                        copy Nt seq
                        • ABR12621.1
                        50291 - 50914 (+) hypothetical protein
                          copy AA seq
                          copy Nt seq
                          • ABR12622.1
                          • erg25
                          56117 - 57262 (-) C4-methylsterol oxidase
                            copy AA seq
                            copy Nt seq
                            Biosynthesis information

                            Biosynthetic modules

                            Name
                            0
                            Type
                            nrps-type1
                            Genes
                            pcbAB
                            Substrates
                            2-aminoadipic acid (evidence: ACVS assay [1])
                            Integrated Monomers
                            Domains
                            adenylation
                            Name
                            1
                            Type
                            nrps-type1
                            Genes
                            pcbAB
                            Substrates
                            cysteine (evidence: ACVS assay [1])
                            Integrated Monomers
                            Domains
                            condensation (DCL), adenylation
                            Name
                            2
                            Type
                            nrps-type1
                            Genes
                            pcbAB
                            Substrates
                            valine (evidence: ACVS assay [1])
                            Integrated Monomers
                            Domains
                            condensation (LCL), adenylation, epimerase
                            Annotation changelog

                            Entry version: 4

                            Date
                            Changes
                            Submitters
                            Reviewers
                            Update chemical activity to schema version 2.11
                            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                            Entry version: 3

                            Date
                            Changes
                            Submitters
                            Reviewers
                            Corrected NRP module activity
                            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                            Updated NRP substrate specificities
                            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                            Entry version: 2

                            Date
                            Changes
                            Submitters
                            Reviewers
                            Migrated from v1.4
                            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                            Entry version: 1

                            Date
                            Changes
                            Submitters
                            Reviewers
                            Submitted
                            • (ID: 53KWSSAVU3NHQPX32A2FHV6D)
                            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                            Detailed domain annotation
                            Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
                            A domain glossary is available here, and an explanation of the visualisation is available here.
                            Selected features only
                            Show module domains
                            Similar known gene clusters from MIBiG 4.0
                            Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
                            Click on reference genes to show details of similarities to genes within the current region.
                            Click on an accession to open that entry in the MiBIG database.