BGC0000575 - 1 region(s) - antiSMASH results

BGC0000575 (Rhodococcus jostii)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1	lassopeptide	1	5,596

BGC0000575 - Region 1 - lassopeptide

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Location: 1 - 5,596 nt. (total: 5,596 nt) Show pHMM detection rules used

Region on contig edge.

lassopeptide: (PF13471 and Asn_synthase or micJ25 or mcjC)

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG

MIBiG comparison

KnownClusterBlast

Lasso peptides

External annotation

Name		MIBiG
Version		3.0

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000575.1	0.87	RiPP	lariatin	Rhodococcus jostii
BGC0001549.1	0.35	RiPP	citrulassin B	Streptomyces aurantiacus JA 4570
BGC0000571.1	0.32	RiPP	burhizin	Paraburkholderia rhizoxinica HKI 454
BGC0001551.1	0.31	RiPP	citrulassin E	Streptomyces glaucescens
BGC0001552.1	0.27	RiPP	citrulassin F	Streptomyces avermitilis MA-4680 = NBRC 14893
BGC0001889.1	0.27	RiPP	fusilassin	Thermobifida fusca YX
BGC0001494.1	0.27	RiPP	acinetodin	Acinetobacter gyllenbergii CIP 110306
BGC0001550.1	0.25	RiPP	citrulassin D	Streptomyces katrae
BGC0002006.1	0.25	RiPP	albusnodin	Streptomyces albus
BGC0001645.1	0.25	RiPP	lagmysin	Streptomyces sp. NRRL S-118

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000575.1	0.96	RiPP	lariatin	Rhodococcus jostii
BGC0001549.1	0.68	RiPP	citrulassin B	Streptomyces aurantiacus JA 4570
BGC0000571.1	0.66	RiPP	burhizin	Paraburkholderia rhizoxinica HKI 454
BGC0001551.1	0.64	RiPP	citrulassin E	Streptomyces glaucescens
BGC0001552.1	0.61	RiPP	citrulassin F	Streptomyces avermitilis MA-4680 = NBRC 14893
BGC0001889.1	0.61	RiPP	fusilassin	Thermobifida fusca YX
BGC0001494.1	0.60	RiPP	acinetodin	Acinetobacter gyllenbergii CIP 110306
BGC0001550.1	0.59	RiPP	citrulassin D	Streptomyces katrae
BGC0002006.1	0.59	RiPP	albusnodin	Streptomyces albus
BGC0001645.1	0.59	RiPP	lagmysin	Streptomyces sp. NRRL S-118

Similar known gene clusters

No matches found.

Lasso peptide predictions

larA

Leader:

MTSQPSKKTYNAPSLVQRGKFARTTA

Full core:

GSQLVYREWVGHSNVIKPGP

Putative macrolactam:

GSQLVYRE

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Lasso peptides

Core peptide predictions

larA - Class II: Cleavage pHMM score: 6.10; RODEO score: 23; Monoisotopic mass: 2204.1 Da; Molecular weight: 2205.5 Da; Number of bridges: 0