BGC0000837 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

BGC0000837 (Aliivibrio fischeri ES114)

Region	Type	From	To	Similarity Confidence	Most similar known cluster
Region 1	arylpolyene	1	43,626	High	APE Vf	other:other

BGC0000837 - Region 1 - arylpolyene

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Location: 1 - 43,626 nt. (total: 43,626 nt) Show pHMM detection rules used

Region on contig edge.

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

MIBiG

Tailoring

MIBiG comparison

KnownClusterBlast

NRPS/PKS domains

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

External annotation

Name		MIBiG
Version		4.0alpha

Type		Subregion
Location		1 - 43,627
Label		BGC0000837

Tailoring functions

Oxidoreductases: dehydrogenase

VF_0859: short-chain dehydrogenase/reductase SDR

smcogs: SMCOG1001: short-chain dehydrogenase/reductase SDR

Transferases: acyltransferase halogenase methyltransferase

VF_0841: conventional flavin-dependent halogenase

halogenases: conventional flavin-dependent halogenase
smcogs: SMCOG1119: halogenase

VF_0842: O-methyltransferase

smcogs: SMCOG1042: O-methyltransferase

VF_0845: acyltransferase

smcogs: SMCOG1141: acyltransferase

Ligases: ligase synthase

VF_0849: AMP-dependent synthetase and ligase

smcogs: SMCOG1002: AMP-dependent synthetase and ligase

VF_0851: polyprenol-monophosphomannose synthase ppm1

smcogs: SMCOG1123: polyprenol-monophosphomannose synthase ppm1

VF_0857: Beta-ketoacyl synthase

smcogs: SMCOG1022: Beta-ketoacyl synthase

VF_0860: Beta-ketoacyl synthase

smcogs: SMCOG1022: Beta-ketoacyl synthase

Translocases: transport

VF_0855: MMPL domain-containing transport protein

smcogs: SMCOG1035: MMPL domain-containing transport protein

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000837.4	1.00	other (other)	APE Vf	Aliivibrio fischeri ES114
BGC0002608.2	0.75	NRPS, PKS	ochratoxin A	Aspergillus steynii
BGC0002341.2	0.75	other (other)	3,5-dibromo-p-anisic acid	Planctomycetales bacterium 10988
BGC0002008.3	0.68	other (other)	aryl polyenes	Xenorhabdus doucetiae
BGC0000836.5	0.65	other (other)	APE Ec	Escherichia coli CFT073
BGC0002191.2	0.62	PKS	prolipyrone B, gibepyrone D	Fusarium graminearum PH-1
BGC0002175.3	0.59	PKS	YWA1	Aspergillus oryzae RIB40
BGC0000107.3	0.59	PKS	naphthopyrone	Aspergillus nidulans FGSC A4
BGC0001197.5	0.48	PKS	frankiamicin	Frankia sp. EAN1pec
BGC0001987.2	0.48	PKS	koreenceine A, koreenceine B, koreenceine C, koreenceine D	Pseudomonas koreensis

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000837.4	1.00	other (other)	APE Vf	Aliivibrio fischeri ES114
BGC0002608.2	0.75	NRPS, PKS	ochratoxin A	Aspergillus steynii
BGC0002341.2	0.75	other (other)	3,5-dibromo-p-anisic acid	Planctomycetales bacterium 10988
BGC0002008.3	0.68	other (other)	aryl polyenes	Xenorhabdus doucetiae
BGC0000836.5	0.65	other (other)	APE Ec	Escherichia coli CFT073
BGC0002191.2	0.62	PKS	prolipyrone B, gibepyrone D	Fusarium graminearum PH-1
BGC0002175.3	0.59	PKS	YWA1	Aspergillus oryzae RIB40
BGC0000107.3	0.59	PKS	naphthopyrone	Aspergillus nidulans FGSC A4
BGC0001197.5	0.48	PKS	frankiamicin	Frankia sp. EAN1pec
BGC0001987.2	0.48	PKS	koreenceine A, koreenceine B, koreenceine C, koreenceine D	Pseudomonas koreensis

Similar known clusters from MIBiG 4.0

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS substrates

NRPS/PKS substrate predictions

VF_0849: X

AMP-binding (25..297): X

nrpys: Gly, Ala, Val, Leu, Ile, Abu, Ival

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: --FIFSVGIK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

Link to PARAS substrate predictor