BGC0000837 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

BGC0000837 (Aliivibrio fischeri ES114)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1	arylpolyene	1	18,539	APE Vf	other:other	100%

BGC0000837 - Region 1 - arylpolyene

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Location: 1 - 18,539 nt. (total: 18,539 nt) Show pHMM detection rules used

Region on contig edge.

arylpolyene: (APE_KS1 or APE_KS2)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

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Gene details

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Gene overview

MIBiG

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

External annotation

Name		MIBiG
Version		4.0alpha

Type		Subregion
Location		1 - 18,540
Label		BGC0000837

Detailed domain annotation

Selected features only

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Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000837	1.00	Other	APE Vf	Aliivibrio fischeri ES114
BGC0002008	0.35	Other	aryl polyenes	Xenorhabdus doucetiae
BGC0000836	0.32	Other	APE Ec	Escherichia coli CFT073
BGC0002608	0.31	NRP, Polyketide	ochratoxin A	Aspergillus steynii
BGC0002341	0.31	Other	3,5-dibromo-p-anisic acid	Planctomycetales bacterium 10988
BGC0000231	0.24	Polyketide	griseusin A, griseusin B	Streptomyces griseus
BGC0000196	0.22	Polyketide	AQ-256, AQ-270a, AQ-284a	Photorhabdus laumondii subsp. laumondii TTO1
BGC0000272	0.21	Polyketide	spore pigment	Streptomyces collinus
BGC0001463	0.21	Other	2,3,4,5-tetrabromopyrrole	Pseudoalteromonas piscicida
BGC0001464	0.21	Other	tetrabromopyrrole	Pseudoalteromonas sp. PS5

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000837	1.00	Other	APE Vf	Aliivibrio fischeri ES114
BGC0002008	0.68	Other	aryl polyenes	Xenorhabdus doucetiae
BGC0000836	0.65	Other	APE Ec	Escherichia coli CFT073
BGC0002608	0.65	NRP, Polyketide	ochratoxin A	Aspergillus steynii
BGC0002341	0.64	Other	3,5-dibromo-p-anisic acid	Planctomycetales bacterium 10988
BGC0000231	0.57	Polyketide	griseusin A, griseusin B	Streptomyces griseus
BGC0000196	0.55	Polyketide	AQ-256, AQ-270a, AQ-284a	Photorhabdus laumondii subsp. laumondii TTO1
BGC0000272	0.54	Polyketide	spore pigment	Streptomyces collinus
BGC0001463	0.54	Other	2,3,4,5-tetrabromopyrrole	Pseudoalteromonas piscicida
BGC0001464	0.53	Other	tetrabromopyrrole	Pseudoalteromonas sp. PS5

Similar known gene clusters from MIBiG 4.0

NRPS/PKS substrates

NRPS/PKS substrate predictions

VF_0849

AMP-binding (25..297): X

nrpys: Gly, Ala, Val, Leu, Ile, Abu, Ival

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: --FIFSVGIK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)