BGC0000862 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

BGC0000862 (Shewanella pneumatophori)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1	hglE-KS,PUFA	1	37,895	eicoseicosapentaenoic acid	Other	21%

BGC0000862 - Region 1 - PUFA,hglE-KS

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Location: 1 - 37,895 nt. (total: 37,895 nt) Show pHMM detection rules used

Region on contig edge.

hglE-KS: (hglE or hglD)
PUFA: PUFA_KS

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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Gene details

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MIBiG

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

NRPS/PKS modules

External annotation

Name		MIBiG
Version		3.0

Type		Subregion
Location		1 - 37,896
Label		BGC0000862

Detailed domain annotation

Selected features only

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Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000862.1	2.00	Other	eicosapentaenoic acid	Shewanella pneumatophori
BGC0000861.1	0.95	Other	eicosapentaenoic acid	Shewanella sp. BR-2
BGC0000863.1	0.53	Other	eicosapentaenoic acid	Pseudoalteromonas sp. DS-12
BGC0001144.1	0.51	Polyketide	neosartoricin B	Trichophyton tonsurans CBS 112818
BGC0000864.1	0.51	Other	eicosapentaenoic acid-like compound	Moritella marina ATCC 15381
BGC0000048.1	0.50	Polyketide	dothistromin	Dothistroma septosporum
BGC0000161.1	0.50	Polyketide	isoterrein	Aspergillus terreus NIH2624
BGC0000865.1	0.49	Other	eicoseicosapentaenoic acid	Photobacterium profundum SS9
BGC0000284.1	0.49	Polyketide	phenolic lipids	Azotobacter vinelandii DJ
BGC0000056.1	0.47	Polyketide	esperamicin	Actinomadura verrucosospora

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000862.1	1.00	Other	eicosapentaenoic acid	Shewanella pneumatophori
BGC0000861.1	0.77	Other	eicosapentaenoic acid	Shewanella sp. BR-2
BGC0000863.1	0.60	Other	eicosapentaenoic acid	Pseudoalteromonas sp. DS-12
BGC0001144.1	0.59	Polyketide	neosartoricin B	Trichophyton tonsurans CBS 112818
BGC0000864.1	0.59	Other	eicosapentaenoic acid-like compound	Moritella marina ATCC 15381
BGC0000048.1	0.59	Polyketide	dothistromin	Dothistroma septosporum
BGC0000161.1	0.58	Polyketide	isoterrein	Aspergillus terreus NIH2624
BGC0000865.1	0.58	Other	eicoseicosapentaenoic acid	Photobacterium profundum SS9
BGC0000284.1	0.58	Polyketide	phenolic lipids	Azotobacter vinelandii DJ
BGC0000056.1	0.57	Polyketide	esperamicin	Actinomadura verrucosospora

Similar known gene clusters

Module view

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 37895:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

AAB81123.1

PKS_AT (604..915): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; inactive: 70.8%; 2-Rhyd-Malonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 84.5
inactive: 34.1
Methoxymalonyl-CoA: 30.0
Methylmalonyl-CoA: 26.5
CHC-CoA: 18.2
Isobutyryl-CoA: 18.1
fatty_acid: 14.5
Propionyl-CoA: 12.5
trans-1,2-CPDA: 0.0
Ethylmalonyl-CoA: 0.0
Benzoyl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0
2-Methylbutyryl-CoA: 0.0

AAB81124.1

PKS_AT (390..698): pk

ATSignature: (unknown)

No matches above 50%

minowa: Isobutyryl-CoA

Prediction, score:

Isobutyryl-CoA: 11.4
trans-1,2-CPDA: 0.0
inactive: 0.0
fatty_acid: 0.0
Propionyl-CoA: 0.0
Methylmalonyl-CoA: 0.0
Methoxymalonyl-CoA: 0.0
Malonyl-CoA: 0.0
Ethylmalonyl-CoA: 0.0
CHC-CoA: 0.0
Benzoyl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0
2-Methylbutyryl-CoA: 0.0