BGC0000863: eicosapentaenoic acid biosynthetic gene cluster from Pseudoalteromonas sp. DS-12
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Location: 1 - 17,116 nt. (total: 17,116 nt).
This entry is originally from NCBI GenBank DQ469875.1.

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core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
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General
Compounds
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Biosynthesis
History
Tailoring
KnownClusterBlast
NRPS/PKS domains
General information about the BGC
MIBiG accession BGC0000863
Short description eicosapentaenoic acid biosynthetic gene cluster from Pseudoalteromonas sp. DS-12
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • other (other)
Loci
DQ469875.1
via
Compounds
  • eicosapentaenoic acid
Species Pseudoalteromonas sp. DS-12 [taxonomy]
References
Chemical products information
eicosapentaenoic acid Evidence:
Copy SMILES
C20H30O2
Chemical database entries
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • ABF00127.1
  • pfaA
 1225 - 9507 (+) polyunsaturated fatty acid synthase
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    • ABF00128.1
    • pfaB
    		 9508 - 12468 (+) polyunsaturated fatty acid synthase
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      • ABF00129.1
      		 12625 - 13398 (+) unknown
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        • ABF00130.1
        • pfaD
        		 13522 - 16560 (+) polyunsaturated fatty acid synthase
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          Biosynthesis information

          No biosynthesis information available for this record.

          Annotation changelog

          Entry version: 2

          Date
          Changes
          Submitters
          Reviewers
          2019-10-16
          Migrated from v1.4
          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
          2019-10-16
          Updated reference publication(s) (MIBiG Annotathon)
          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

          Entry version: 1

          Date
          Changes
          Submitters
          Reviewers
          2015-06-12
          Submitted
          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
          Tailoring functions
          Tailoring enzymes detected in this region
          Transferases: PPTase
          pfaD: 4'-phosphopantetheinyl transferase
          smcogs
          SMCOG1012: 4'-phosphopantetheinyl transferase
          Ligases: synthase
          pfaA: Beta-ketoacyl synthase
          smcogs
          SMCOG1022: Beta-ketoacyl synthase
          pfaB: Beta-ketoacyl synthase
          smcogs
          SMCOG1022: Beta-ketoacyl synthase
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