BGC0000863 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

BGC0000863 (Pseudoalteromonas sp. DS-12)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1	PUFA,hglE-KS	1	17,116	eicosapentaenoic acid	Other	22%

BGC0000863 - Region 1 - PUFA,hglE-KS

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Location: 1 - 17,116 nt. (total: 17,116 nt) Show pHMM detection rules used

Region on contig edge.

PUFA: PUFA_KS
hglE-KS: (hglE or hglD)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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Gene details

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MIBiG

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

NRPS/PKS modules

External annotation

Name		MIBiG
Version		3.0

Type		Subregion
Location		1 - 17,117
Label		BGC0000863

Detailed domain annotation

Selected features only

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Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000863.1	2.00	Other	eicosapentaenoic acid	Pseudoalteromonas sp. DS-12
BGC0000284.1	0.48	Polyketide	phenolic lipids	Azotobacter vinelandii DJ
BGC0000056.1	0.47	Polyketide	esperamicin	Actinomadura verrucosospora
BGC0000041.1	0.46	Polyketide	oronofacic acid	Pseudomonas syringae
BGC0000862.1	0.42	Other	eicosapentaenoic acid	Shewanella pneumatophori
BGC0001542.1	0.42	Polyketide	cercosporin	Cercospora zeina
BGC0000861.1	0.41	Other	eicosapentaenoic acid	Shewanella sp. BR-2
BGC0001541.1	0.41	Polyketide	cercosporin	Cercospora beticola
BGC0001404.1	0.40	Polyketide	sorbicillin	Penicillium rubens Wisconsin 54-1255
BGC0000161.1	0.40	Polyketide	isoterrein	Aspergillus terreus NIH2624

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000863.1	1.00	Other	eicosapentaenoic acid	Pseudoalteromonas sp. DS-12
BGC0000284.1	0.57	Polyketide	phenolic lipids	Azotobacter vinelandii DJ
BGC0000056.1	0.57	Polyketide	esperamicin	Actinomadura verrucosospora
BGC0000041.1	0.56	Polyketide	oronofacic acid	Pseudomonas syringae
BGC0000862.1	0.54	Other	eicosapentaenoic acid	Shewanella pneumatophori
BGC0001542.1	0.53	Polyketide	cercosporin	Cercospora zeina
BGC0000861.1	0.53	Other	eicosapentaenoic acid	Shewanella sp. BR-2
BGC0001541.1	0.53	Polyketide	cercosporin	Cercospora beticola
BGC0001404.1	0.52	Polyketide	sorbicillin	Penicillium rubens Wisconsin 54-1255
BGC0000161.1	0.52	Polyketide	isoterrein	Aspergillus terreus NIH2624

Similar known gene clusters

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 17116:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

pfaA

PKS_AT (608..916): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 66.7%; inactive: 58.3%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 80.3
inactive: 41.6
Methoxymalonyl-CoA: 29.0
Methylmalonyl-CoA: 26.1
fatty_acid: 12.8
trans-1,2-CPDA: 0.0
Propionyl-CoA: 0.0
Isobutyryl-CoA: 0.0
Ethylmalonyl-CoA: 0.0
CHC-CoA: 0.0
Benzoyl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0
2-Methylbutyryl-CoA: 0.0