BGC0001076 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

BGC0001076 (Streptomyces sp. SN-1061M)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1	T3PKS,nucleoside	1	29,709	liposidomycin B/liposidomycin A/liposidomycin C/liposidomycin Z/liposidomycin H/liposidomycin G/liposidomycin L/liposidomycin M/liposidomycin K/liposidomycin N	other:nucleoside	100%

BGC0001076 - Region 1 - T3PKS,nucleoside

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Location: 1 - 29,709 nt. (total: 29,709 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)
nucleoside: (LipM or LipV or LipU or ToyB or TunD or pur6 or pur10 or nikJ or nikO or truD)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

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resistance

TTA codons

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Gene details

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Gene overview

MIBiG

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

External annotation

Name		MIBiG
Version		4.0alpha

Type		Subregion
Location		1 - 29,710
Label		BGC0001076

Detailed domain annotation

Selected features only

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Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001076	1.63	Other (Nucleoside)	liposidomycin B, liposidomycin A, liposidomycin C, liposidomycin Z, liposidomycin H, liposidomycin G, liposidomycin L, liposidomycin M, liposidomycin K, liposidomycin N	Streptomyces sp. SN-1061M
BGC0000872	0.89	Other	A-90289 A, A-90289 B	Streptomyces sp. SANK 60405
BGC0000875	0.86	Other (Nucleoside), Saccharide	caprazamycin, caprazamycin aglycon	Streptomyces sp. MK730-62F2
BGC0001905	0.78	Polyketide	violapyrone B	Streptomyces somaliensis
BGC0000860	0.46	Other	ectoine	Methylarcula marina
BGC0000662	0.46	Terpene	grixazone A	Streptomyces griseus subsp. griseus NBRC 13350
BGC0001869	0.41	Other (Phenazine), NRP	griseoluteic acid, demethoxygriseoluteic acid, phenaszentine A, phenaszentine C, phenaszenketide C, phenaszenketide D	Xenorhabdus szentirmaii DSM 16338
BGC0001302	0.41	Other	lomofungin	Streptomyces lomondensis
BGC0000258	0.37	Polyketide	prodigiosin	Serratia sp.
BGC0000259	0.36	Polyketide	prodigiosin	Serratia marcescens

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001076	1.00	Other (Nucleoside)	liposidomycin B, liposidomycin A, liposidomycin C, liposidomycin Z, liposidomycin H, liposidomycin G, liposidomycin L, liposidomycin M, liposidomycin K, liposidomycin N	Streptomyces sp. SN-1061M
BGC0000872	0.79	Other	A-90289 A, A-90289 B	Streptomyces sp. SANK 60405
BGC0000875	0.78	Other (Nucleoside), Saccharide	caprazamycin, caprazamycin aglycon	Streptomyces sp. MK730-62F2
BGC0001905	0.71	Polyketide	violapyrone B	Streptomyces somaliensis
BGC0000286	0.64	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0001078	0.63	Terpene, Polyketide	furaquinocin B	Streptomyces sp. KO-3988
BGC0002561	0.63	Alkaloid	phenazine SA, phenazine SB, phenazine SC	Streptomyces sp.
BGC0001080	0.62	Other (Phenazine)	endophenazine A, endophenazine B	Streptomyces anulatus
BGC0000934	0.59	Other (Phenazine)	5-acetyl-5,10-dihydrophenazine-1-carboxylic acid, 5-(2-hydroxyacetyl)-5,10-dihydrophenazine-1-carboxylic acid, endophenazine A1, endophenazine F, endophenazine G	Kitasatospora sp. HKI 714
BGC0001079	0.57	Polyketide, Terpene	napyradiomycin A80915C, napyradiomycin 2, napyradiomycin 3, napyradiomycin 4	Streptomyces aculeolatus

Similar known gene clusters from MIBiG 4.0

NRPS/PKS substrates

NRPS/PKS substrate predictions

lpmR

AMP-binding (79..304): X

nrpys: (unknown)

SVM prediction details:

NOTE: uncertain match

Predicted physicochemical class:: N/A
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: ---LTG-FAK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)